Name: [Hs02758588_cn] [PARD6A]
Creator: Thermo Fisher Scientific
Keywords: [PARD6A] Assay, [par-6 family cell polarity regulator alpha] Assay

Genomic Map

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Assay Details

Target Gene Details

Entrez Gene ID:	50855
Gene Name:	par-6 family cell polarity regulator alpha
Gene Aliases:	PAR-6A, PAR6, PAR6C, PAR6alpha, TAX40, TIP-40
Location:	Chr.16:67660948-67662778 on Build GRCh38
Assay Gene Location:	Within Exon 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PARD6A	NM_001037281.1	3	855	NP_001032358.1
	NM_016948.2	3	858	NP_058644.1
	XM_005255977.3	3	883	XP_005256034.1
	XM_011523095.2	3	880	XP_011521397.1
	XM_011523096.2	3	862	XP_011521398.1
	XM_017023261.1	3	826	XP_016878750.1
	AB041642.1	3	820	BAB16105.1
	AB043634.1	3	847	BAA96235.1
	AF028827.1	1	424	AAB84252.1
	AF252292.1	3	896	AAF71529.1
	AF265565.1	3	829	AAF75548.1
	AJ277095.1	3	818	CAB85490.1
	BC015626.2	3	835	AAH15626.1

Target Copy Number Variation Details

DGV Version:

Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv522852	Chr.16:67153308 - 68071571 on Build GRCh38	Gain	ACD KIAA0895L CTRL LOC105369155 CTCF KCTD19 PARD6A LRRC36 PSMB10 E2F4 DPEP3 ELMO3 GFOD2 FAM65A PSKH1 FHOD1 PLEKHG4 CENPT NRN1L C16orf86 HSD11B2 DPEP2 NUTF2 ENKD1 HSF4 CARMIL2 ZDHHC1 SLC12A4 EDC4 DUS2 LRRC29 THAP11 AGRP LCAT LOC100505942 DDX28 SLC9A5 EXOC3L1 TMEM208 TRADD RANBP10 TPPP3 ATP6V0D1 MIR328 FBXL8 TSNAXIP1 LOC100131303 LOC107984813 NOL3
nsv952046	Chr.16:67628798 - 67678697 on Build GRCh38	Deletion	ACD GFOD2 CARMIL2 CTCF C16orf86 ENKD1 PARD6A
nsv524363	Chr.16:67136529 - 68071571 on Build GRCh38	Loss	ACD KIAA0895L CTRL LOC105369155 CTCF KCTD19 PARD6A LRRC36 PSMB10 E2F4 DPEP3 ELMO3 GFOD2 FAM65A PSKH1 FHOD1 PLEKHG4 CENPT NRN1L C16orf86 HSD11B2 DPEP2 NUTF2 ENKD1 HSF4 CARMIL2 ZDHHC1 SLC12A4 EDC4 DUS2 LRRC29 THAP11 AGRP LCAT LOC100505942 C16orf70 DDX28 SLC9A5 EXOC3L1 TMEM208 B3GNT9 TRADD RANBP10 TPPP3 ATP6V0D1 MIR328 FBXL8 TSNAXIP1 LOC100131303 LOC107984813 NOL3