Hs02768063_cn

• Gene Symbol: YTHDF1
• Assay Reference Genome Location: Chr.20:63202317 on build GRCh38
• Cytoband: 20q13.33

Target Gene Details

• Entrez Gene ID: 54915
• Gene Name: YTH N6-methyladenosine RNA binding protein 1
• Gene Aliases: C20orf21
• Location: Chr.20:63195429-63216186 on Build GRCh38
• Assay Gene Location: Overlaps Intron 4 - Exon 4

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
YTHDF1	NM_017798.3			NP_060268.2
	AB055518.1			BAB62751.1
	AK000398.1			BAA91138.1
	AK095795.1
	AK300073.1
	AL834366.1			CAD39029.1
	BC003681.1			AAH03681.1
	BC016920.2			AAH16920.2
	BC025264.1			AAH25264.1
	BC050284.1			AAH50284.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv519n27	Chr.20:63154307 - 63248817 on Build GRCh38	Loss	BIRC7 MIR124-3 YTHDF1 LOC107985425 MIR3196 NKAIN4
nsv953306	Chr.20:63151949 - 63571247 on Build GRCh38	Deletion	BIRC7 LOC102723788 PPDPF LOC107985425 MIR3196 MIR4326 NKAIN4 FNDC11 LOC100130152 PTK6 MIR124-3 YTHDF1 EEF1A2 SRMS COL20A1 KCNQ2 CHRNA4 ARFGAP1 FLJ16779 LOC100130587 HELZ2
dgv68n68	Chr.20:63076461 - 63224595 on Build GRCh38	Loss	HAR1A HAR1B MIR124-3 YTHDF1 LOC63930
nsv586559	Chr.20:63195172 - 63248817 on Build GRCh38	Gain	BIRC7 YTHDF1 LOC107985425 MIR3196 NKAIN4
nsv9825	Chr.20:62775470 - 63601330 on Build GRCh38	Gain	DPH3P1 HAR1A LOC102723788 HAR1B PPDPF MIR4326 NKAIN4 FNDC11 LOC100130152 OGFR-AS1 LINC00659 TCFL5 MIR124-3 YTHDF1 OGFR LOC63930 KCNQ2 CHRNA4 FLJ16779 LOC100130587 HELZ2 LINC01056 DIDO1 BIRC7 SLC17A9 LOC107985425 MIR3196 GMEB2 BHLHE23 LINC00029 LOC107985428 PTK6 EEF1A2 SRMS COL20A1 ARFGAP1 GID8 COL9A3 MRGBP
nsv834031	Chr.20:63132252 - 63245925 on Build GRCh38	Loss	BIRC7 MIR124-3 YTHDF1 LOC107985425 MIR3196 NKAIN4

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

positive regulation of translational initiation

Function(s)

ribosome binding
poly(A) RNA binding
N6-methyladenosine-containing RNA binding