Hs02773848_cn

• Gene Symbol: GEMIN4
• Assay Reference Genome Location: Chr.17:745325 on build GRCh38
• Cytoband: 17p13.3

Target Gene Details

• Entrez Gene ID: 50628
• Gene Name: gem nuclear organelle associated protein 4
• Gene Aliases: HC56, HCAP1, HHRF-1, p97
• Location: Chr.17:744421-752868 on Build GRCh38
• Assay Gene Location: Within Exon 5

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
GEMIN4	NM_015721.2	2	2837	NP_056536.2
	XM_005256667.4	3	2954	XP_005256724.1
	XM_005256670.4	2	2959	XP_005256727.1
	XM_011523910.2	3	3215	XP_011522212.1
	XM_011523911.2	3	3055	XP_011522213.1
	XM_011523912.2	2	4355	XP_011522214.1
	XM_011523913.2	2	3241	XP_011522215.1
	XM_017024709.1	4	3307	XP_016880198.1
	AF173856.1	2	2741	AAF35283.1
	AF177341.2	1	4027	AAG17985.1
	AL080150.1	1	2164	CAB45743.3
	AL080167.1			CAB45755.1
	BC020062.1	2	2767	AAH20062.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv5386n54	Chr.17:407766 - 816212 on Build GRCh38	Gain	GEMIN4 DBIL5P C17orf97 FAM57A LOC105371430 NXN FAM101B MRM3 GLOD4 VPS53
dgv3074n100	Chr.17:717681 - 865635 on Build GRCh38	Gain	GEMIN4 DBIL5P FAM57A NXN MRM3 GLOD4
nsv574075	Chr.17:632287 - 745992 on Build GRCh38	Loss	GEMIN4 FAM57A VPS53
nsv1057000	Chr.17:664913 - 866713 on Build GRCh38	Gain	GEMIN4 DBIL5P FAM57A NXN MRM3 GLOD4 VPS53
dgv5389n54	Chr.17:633174 - 937565 on Build GRCh38	Gain	GEMIN4 LOC101927727 DBIL5P FAM57A NXN MRM3 GLOD4 VPS53
nsv1064955	Chr.17:567977 - 797758 on Build GRCh38	Gain	GEMIN4 DBIL5P FAM57A MRM3 GLOD4 VPS53
nsv574090	Chr.17:697017 - 745827 on Build GRCh38	Gain	GEMIN4 FAM57A VPS53
esv2758673	Chr.17:718346 - 1158111 on Build GRCh38	Gain	GEMIN4 LOC101927727 MIR3183 DBIL5P FAM57A LOC100130876 NXN ABR MRM3 GLOD4 TIMM22
nsv469891	Chr.17:663703 - 837834 on Build GRCh38	Loss	GEMIN4 DBIL5P FAM57A NXN MRM3 GLOD4 VPS53
nsv1063272	Chr.17:707786 - 789280 on Build GRCh38	Gain	GEMIN4 DBIL5P FAM57A MRM3 GLOD4 VPS53
dgv5387n54	Chr.17:494867 - 994065 on Build GRCh38	Loss	GEMIN4 LOC101927727 DBIL5P FAM57A LOC100130876 NXN MRM3 GLOD4 VPS53
dgv3071n100	Chr.17:150721 - 853554 on Build GRCh38	Gain	LOC100506388 C17orf97 LOC105371430 LOC100506371 GEMIN4 DOC2B DBIL5P FAM57A NXN FAM101B MRM3 GLOD4 RPH3AL VPS53
esv3639625	Chr.17:425092 - 895536 on Build GRCh38	Gain	GEMIN4 DBIL5P FAM57A NXN FAM101B MRM3 GLOD4 VPS53
dgv3072n100	Chr.17:410957 - 881396 on Build GRCh38	Gain	GEMIN4 DBIL5P C17orf97 FAM57A LOC105371430 NXN FAM101B MRM3 GLOD4 VPS53
esv2422420	Chr.17:210752 - 1113141 on Build GRCh38	Duplication	LOC100506388 LOC101927727 MIR3183 C17orf97 LOC105371430 ABR TIMM22 GEMIN4 DBIL5P FAM57A LOC100130876 NXN FAM101B MRM3 GLOD4 RPH3AL VPS53
esv3639636	Chr.17:717626 - 746281 on Build GRCh38	Gain	GEMIN4 FAM57A
esv3892944	Chr.17:368038 - 947302 on Build GRCh38	Gain	LOC101927727 C17orf97 LOC105371430 GEMIN4 DBIL5P FAM57A LOC100130876 NXN FAM101B MRM3 GLOD4 RPH3AL VPS53

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

spliceosomal snRNP assembly
rRNA processing
nuclear import

Function(s)

protein binding