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See other PCOLCE CNV Assays ›
Gene Symbol
PCOLCE
Assay Reference Genome
Location

Chr.7:100605746 on build GRCh38
Cytoband
7q22.1
Assay ID Hs02774693_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 5118

Gene Name:

 procollagen C-endopeptidase enhancer

Gene Aliases:

 PCPE, PCPE-1, PCPE1

Location:

 Chr.7:100602259-100608175 on Build GRCh38

Assay Gene Location:

 Within Exon 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PCOLCE NM_002593.3 5 857 NP_002584.2
AB008549.1 5 715 BAA23281.1
AK313748.1 5 753
BC000574.2 5 750 AAH00574.1
BC033205.1 5 695 AAH33205.1
L33799.1 5 719 AAA61949.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2659884 Chr.7:100600622 - 100605969 on Build GRCh38 Deletion PCOLCE PCOLCE-AS1 FBXO24
esv2734888 Chr.7:99975623 - 101290285 on Build GRCh38 Deletion PLOD3 LRCH4 UFSP1 LAMTOR4 GNB2 CLDN15 MIR4658 MIR93 MIR106B NAT16 FIS1 TAF6 GPC2 ZNHIT1 GAL3ST4 POP7 MBLAC1 MCM7 MOSPD3 TSC22D4 AP1S1 PMS2P1 SAP25 LOC105375429 MIR4653 PVRIG MIR6875 PVRIG2P AP4M1 MIR25 STAG3 MEPCE ZASP AGFG2 SLC12A9 PPP1R35 PILRB TRIP6 SRRT MOGAT3 AZGP1 GATS PILRA MUC12 TRIM56 MUC3A EPHB4 LOC102724094 PCOLCE AZGP1P1 SPDYE3 C7orf43 VGF TFR2 MUC17 STAG3L5P SERPINE1 ZNF3 ZCWPW1 ACHE NYAP1 ZSCAN21 ACTL6B PCOLCE-AS1 CNPY4 FBXO24 EPO ZKSCAN1 STAG3L5P-PVRIG2P-PILRB C7orf61 GIGYF1 COPS6 ZAN MIR6840
nsv951386 Chr.7:100566478 - 100682977 on Build GRCh38 Deletion LRCH4 GNB2 SAP25 LOC105375429 ACTL6B PCOLCE-AS1 FBXO24 PCOLCE TFR2 MOSPD3 ZASP GIGYF1 AGFG2
nsv831072 Chr.7:100564880 - 100765212 on Build GRCh38 Loss LRCH4 GNB2 SAP25 LOC105375429 ACTL6B PCOLCE-AS1 FBXO24 EPO PCOLCE POP7 TFR2 MOSPD3 ZASP GIGYF1 ZAN AGFG2
nsv5868 Chr.7:100572375 - 100617023 on Build GRCh38 Deletion LRCH4 PCOLCE SAP25 MOSPD3 ZASP PCOLCE-AS1 FBXO24

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:

Molecular Function -

serine protease

Gene Ontology Categories:

Function(s) Process(es)


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