Hs02775103_cn

• Gene Symbol: RAB40B
• Assay Reference Genome Location: Chr.17:82657176 on build GRCh38
• Cytoband: 17q25.3

Target Gene Details

• Entrez Gene ID: 10966
• Gene Name: RAB40B, member RAS oncogene family
• Gene Aliases: RAR, SEC4L
• Location: Chr.17:82657067-82698722 on Build GRCh38
• Assay Gene Location: Within Exon 10

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
RAB40B	NM_006822.2	6	1650	NP_006813.1
	XM_005256334.4	6	1853	XP_005256391.1
	XM_006722271.3	6	1419	XP_006722334.1
	XM_011523528.2	6	1772	XP_011521830.1
	XM_017024042.1	7	2285	XP_016879531.1
	XM_017024043.1	6	1762	XP_016879532.1
	AK095782.1	1	2414
	AK124376.1	2	2266
	U05227.1	6	1569	AAA17031.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1067553	Chr.17:82530808 - 83091923 on Build GRCh38	Loss	FOXK2 B3GNTL1 LOC101929552 MIR4525 WDR45B METRNL LOC105376791 ZNF750 TBCD LOC105371944 FN3K FN3KRP RAB40B
nsv1067362	Chr.17:82569201 - 82681793 on Build GRCh38	Gain	FOXK2 MIR4525 WDR45B RAB40B
nsv1062980	Chr.17:82408938 - 82687942 on Build GRCh38	Gain	HEXDC FOXK2 OGFOD3 MIR4525 WDR45B C17orf62 NARF RAB40B
nsv428351	Chr.17:81152631 - 83064073 on Build GRCh38	Gain	ANAPC11 HEXDC P4HB AATK-AS1 C17orf62 ALYREF MIR6787 NPLOC4 MIR4740 TEPSIN DUS1L ZNF750 LOC105371944 UTS2R NPB FASN RAB40B SLC25A10 HGS RAC3 GCGR MIR3186 PCYT2 LOC105376791 CCDC137 MCRIP1 BAHCC1 OXLD1 CD7 SNORD134 CEP131 TMEM105 CCDC57 NARF PPP1R27 LINC00482 LOC105371925 LRRC45 MIR6786 TSPAN10 FOXK2 NOTUM B3GNTL1 SLC38A10 MAFG ACTG1 DCXR TBCD SIRT7 FN3K FAAP100 FSCN2 SLC16A3 AATK ARL16 MAFG-AS1 C17orf89 STRA13 ASPSCR1 RFNG MRPL12 LOC101929552 MIR4525 WDR45B PDE6G MYADML2 LOC105376790 LOC101929511 ARHGDIA OGFOD3 TEX19 SECTM1 CSNK1D LOC100130370 FN3KRP PYCR1 GPS1
esv2762577	Chr.17:82244836 - 82838431 on Build GRCh38	Gain+Loss	HEXDC FOXK2 LOC101929552 MIR4525 WDR45B C17orf62 LOC105376791 LOC105376790 LOC101929511 ZNF750 TBCD UTS2R OGFOD3 FN3K TEX19 SECTM1 CD7 CSNK1D FN3KRP NARF RAB40B
esv21913	Chr.17:81828123 - 83103548 on Build GRCh38	Gain+Loss	ANAPC11 HEXDC P4HB C17orf62 ALYREF MIR6787 DUS1L ZNF750 LOC105371944 UTS2R NPB FASN RAB40B RAC3 PCYT2 LOC105376791 MCRIP1 CD7 SNORD134 CCDC57 NARF PPP1R27 LRRC45 FOXK2 NOTUM B3GNTL1 MAFG METRNL DCXR TBCD SIRT7 FN3K SLC16A3 MAFG-AS1 STRA13 ASPSCR1 RFNG LOC101929552 MIR4525 WDR45B MYADML2 LOC105376790 LOC101929511 ARHGDIA OGFOD3 TEX19 SECTM1 CSNK1D FN3KRP PYCR1 GPS1

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

small GTPase mediated signal transduction
protein ubiquitination
symbiont intracellular protein transport in host

Function(s)

GTP binding