Hs02798612_cn

• Gene Symbol: AFG3L1P
• Assay Reference Genome Location: Chr.16:89988864 on build GRCh38
• Cytoband: 16q24.3

Target Gene Details

• Entrez Gene ID: 172
• Gene Name: AFG3 like matrix AAA peptidase subunit 1, pseudogene
• Gene Aliases: AFG3, AFG3L1
• Location: Chr.16:89972580-90000787 on Build GRCh38
• Assay Gene Location: Overlaps Intron 6 - Exon 7

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
AFG3L1P	NR_003226.1
	NR_003227.1
	NR_003228.1
	AF329691.1
	AF329692.1	1	83
	AK056488.1
	AK091293.1
	AK097044.1			BAC04933.1
	AK126911.1
	AK128804.1
	AL832984.1			CAH56313.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv573842	Chr.16:89964848 - 90038925 on Build GRCh38	Loss	DBNDD1 GAS8-AS1 GAS8 DEF8 CENPBD1 AFG3L1P
esv3639603	Chr.16:89944533 - 90039438 on Build GRCh38	Gain	DBNDD1 GAS8-AS1 GAS8 DEF8 CENPBD1 AFG3L1P
nsv471120	Chr.16:89977620 - 90063728 on Build GRCh38	Gain	DBNDD1 GAS8-AS1 URAHP GAS8 PRDM7 AFG3L1P
esv2762221	Chr.16:89610380 - 90039318 on Build GRCh38	Gain+Loss	SPATA2L SPATA33 CHMP1A FANCA VPS9D1-AS1 SPIRE2 TUBB3 LOC105371419 ZNF276 CDK10 CENPBD1 DBNDD1 VPS9D1 TCF25 DPEP1 GAS8-AS1 GAS8 DEF8 MC1R LOC107984817 AFG3L1P
nsv573810	Chr.16:89857498 - 90037251 on Build GRCh38	Loss	DBNDD1 TCF25 GAS8-AS1 GAS8 DEF8 MC1R SPIRE2 TUBB3 CENPBD1 AFG3L1P
nsv952080	Chr.16:89982593 - 90047992 on Build GRCh38	Deletion	DBNDD1 GAS8-AS1 URAHP GAS8 AFG3L1P
nsv428331	Chr.16:89216635 - 90185980 on Build GRCh38	Gain+Loss	FAM157C SPIRE2 PRDM7 RPL13 LOC105371419 ZNF276 CENPBD1 DBNDD1 DPEP1 URAHP DEF8 LOC100287036 SPATA2L SNORD68 SPATA33 CHMP1A LOC101927817 ANKRD11 FANCA VPS9D1-AS1 TUBB8P7 TUBB3 CDK10 ZNF778 VPS9D1 TCF25 GAS8-AS1 GAS8 SPG7 MC1R LOC105371414 CPNE7 LOC107984817 AFG3L1P
nsv573799	Chr.16:89852186 - 90022379 on Build GRCh38	Gain	DBNDD1 TCF25 GAS8 DEF8 MC1R SPIRE2 TUBB3 LOC105371419 CENPBD1 AFG3L1P
esv3892941	Chr.16:89941888 - 90002650 on Build GRCh38	Gain	DEF8 CENPBD1 AFG3L1P
nsv471119	Chr.16:89957794 - 90083514 on Build GRCh38	Loss	DBNDD1 GAS8-AS1 URAHP GAS8 DEF8 PRDM7 CENPBD1 AFG3L1P
nsv1066499	Chr.16:89891957 - 90028891 on Build GRCh38	Loss	DBNDD1 TCF25 GAS8 DEF8 MC1R TUBB3 CENPBD1 AFG3L1P
nsv482951	Chr.16:88633593 - 90228345 on Build GRCh38	Loss	FAM157C SNAI3 MIR4722 RPL13 LOC105371419 RNF166 LOC100129697 LOC400558 URAHP DEF8 TRAPPC2L LOC100287036 LOC101927793 SPATA33 PIEZO1 ANKRD11 TUBB3 CDK10 CDH15 CBFA2T3 VPS9D1 LOC107987238 CDT1 TCF25 GAS8-AS1 SPG7 SNAI3-AS1 CPNE7 LOC107984817 GALNS AFG3L1P LINC00304 SPIRE2 PRDM7 ZNF276 LOC339059 CENPBD1 SLC22A31 LOC105371409 DBNDD1 DPEP1 MVD LOC100289580 APRT SPATA2L CTU2 SNORD68 CHMP1A LOC101927817 FANCA VPS9D1-AS1 CYBA TUBB8P7 IL17C ACSF3 ZNF778 GAS8 MC1R PABPN1L LOC105371414

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

metalloprotease