Genomic Map
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Target Gene Details
Entrez Gene ID: | 4287 |
Gene Name: | ataxin 3 |
Gene Aliases: |
AT3, ATX3, JOS, MJD, MJD1, SCA3 |
Location: |
Chr.14:92058552-92106621 on Build GRCh38 |
Assay Gene Location: | Within Exon 13 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| ATXN3 | NM_001127696.1 | 10 | 2513 | NP_001121168.1 |
| NM_001127697.2 | 9 | 2405 | NP_001121169.2 | |
| NM_001164774.1 | 4 | 1875 | NP_001158246.1 | |
| NM_001164776.1 | 5 | 1920 | NP_001158248.1 | |
| NM_001164777.1 | 4 | 1755 | NP_001158249.1 | |
| NM_001164778.1 | 7 | 2073 | NP_001158250.1 | |
| NM_001164779.1 | 7 | 2195 | NP_001158251.1 | |
| NM_001164780.1 | 8 | 2262 | NP_001158252.1 | |
| NM_001164781.1 | 9 | 2348 | NP_001158253.1 | |
| NM_001164782.1 | 3 | 1710 | NP_001158254.1 | |
| NM_004993.5 | 11 | 2558 | NP_004984.2 | |
| NM_030660.4 | 10 | 2393 | NP_109376.1 | |
| NR_028453.1 | 10 | 2472 | ||
| NR_028454.1 | 9 | 2307 | ||
| NR_028455.1 | 11 | 2526 | ||
| NR_028456.1 | 10 | 2361 | ||
| NR_028457.1 | 12 | 2617 | ||
| NR_028458.1 | 10 | 2461 | ||
| NR_028459.1 | 12 | 2612 | ||
| NR_028460.1 | 6 | 1987 | ||
| NR_028461.1 | 10 | 2470 | ||
| NR_028462.1 | 10 | 2449 | ||
| NR_028463.1 | 7 | 2161 | ||
| NR_028464.1 | 10 | 2459 | ||
| NR_028465.1 | 10 | 2481 | ||
| NR_028466.1 | 6 | 2107 | ||
| NR_028467.1 | 10 | 2473 | ||
| NR_028468.1 | 9 | 2305 | ||
| NR_028469.1 | 9 | 2319 | ||
| NR_028470.1 | 4 | 1777 | ||
| NR_031765.1 | 5 | 1974 | ||
| BC095402.1 | 11 | 2545 | AAH95402.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv565519 | Chr.14:92033004 - 92089711 on Build GRCh38 | Loss |
 TRIP11
ATXN3
|
| dgv1956n100 | Chr.14:92056253 - 92104511 on Build GRCh38 | Gain |
ATXN3
|
| nsv1045760 | Chr.14:92030812 - 92090267 on Build GRCh38 | Gain |
TRIP11
ATXN3
|
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Additional Information:
For this assay, SNP(s) [rs74071835] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic
Exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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