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See other HAGHL CNV Assays ›
Gene Symbol
HAGHL
Assay Reference Genome
Location

Chr.16:728330 on build GRCh38
Cytoband
16p13.3
Assay ID Hs02823694_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 84264

Gene Name:

 hydroxyacylglutathione hydrolase-like

Gene Aliases:

 -

Location:

 Chr.16:726936-729746 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 3 - Exon 4
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
HAGHL NM_001290137.1 NP_001277066.1
NM_001290139.1 NP_001277068.1
NM_001323635.1 NP_001310564.1
NM_001323636.1 NP_001310565.1
NM_032304.3 NP_115680.1
XM_005255631.4 XP_005255688.1
XM_005255632.1 XP_005255689.1
XM_011522711.1 XP_011521013.1
XM_011522712.1 XP_011521014.1
XM_017023773.1 XP_016879262.1
XM_017023774.1 XP_016879263.1
AB209331.1 BAD92568.1
AK054841.1 BAB70814.1
AK098340.1 2 927
AK293575.1
BC004353.1 AAH04353.1
BC015008.1 4 495 AAH15008.1
BC033796.1 AAH33796.1
BG469685.1
BG821643.1
BI333301.1
BI818409.1
CD050886.1
DA056485.1
EL736395.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication MPG DDX11L10 CRAMP1 MIR4717 MIR3677 MIR3180-5 ZNF598 FAM234A HBQ1 ATP6V0C IGFALS GFER ABCA17P PKD1 WFIKKN1 HAGHL FAM173A MLST8 TPSG1 BAIAP3 SNHG19 UBE2I MSRB1 FBXL16 MAPK8IP3 MIR3177 METTL26 PRR35 PTX4 NDUFB10 LUC7L WDR90 LOC729652 MIR6768 MIR6859-4 MIR5587 HN1L UNKL MRPL28 AXIN1 ERVK13-1 LOC101929280 ECI1 CCDC78 LOC105371184 SNORA78 LOC106660606 LOC105371047 LOC652276 TELO2 ABCA3 HS3ST6 LINC00235 C16orf59 SNORA10 DECR2 TMEM8A NME3 PRSS27 HBA2 CAPN15 NHLRC4 RNF151 MIR6767 RPL3L SSTR5 MSLN NTHL1 CACNA1H PRR25 CASKIN1 LOC105371049 METRN C1QTNF8 KCTD5 RAB26 STUB1 LMF1-AS1 TSR3 LOC107984876 MIR940 PGP FAHD1 LMF1 NUBP2 SNORD60 HBZ SYNGR3 LOC107987233 NME4 RHBDF1 MCRIP2 WASIR2 E4F1 TBC1D24 POLR3K RAB11FIP3 TRAF7 TSC2 JMJD8 SSTR5-AS1 CHTF18 GNG13 EME2 ARHGDIG MIR4516 NPW NOXO1 TPSB2 C16orf91 HAGH TBL3 DNASE1L2 TPSAB1 LOC100287175 GNPTG IFT140 RPL23AP5 WDR24 LOC105371038 SPSB3 LINC00254 PRSS29P BRICD5 TPSD1 LOC105371046 CCDC154 MIR3176 FLJ42627 RHOT2 SNORA64 PIGQ CLCN7 CEMP1 RPUSD1 MIR662 RNPS1 HBA1 AMDHD2 NPRL3 PDIA2 CCNF MIR1225 MIR3178 NTN3 SLC9A3R2 RPS2 MRPS34 SNRNP25 SOX8 RGS11 TMEM204 SNHG9 RHBDL1 HBM MIR6511B1 LOC100134368 NARFL MEIOB PDPK1 LOC105371045 RAB40C
nsv471063 Chr.16:520623 - 852322 on Build GRCh38 Loss METRN LOC100287175 STUB1 WDR24 LOC105371038 MIR5587 LOC101929280 CCDC78 LOC105371184 LOC107987233 MIR3176 RHOT2 PIGQ RPUSD1 LINC00235 MIR662 MCRIP2 RAB11FIP3 WFIKKN1 HAGHL FAM173A JMJD8 CHTF18 CAPN15 NHLRC4 GNG13 FBXL16 METTL26 RHBDL1 NARFL PRR35 RAB40C MSLN WDR90 PRR25
nsv526903 Chr.16:451362 - 810673 on Build GRCh38 Loss METRN LOC100287175 STUB1 WDR24 LOC105371038 MIR5587 LOC101929280 CCDC78 LOC105371184 LOC107987233 MIR3176 RHOT2 PIGQ RPUSD1 LINC00235 MIR662 MCRIP2 RAB11FIP3 WFIKKN1 HAGHL FAM173A JMJD8 CHTF18 CAPN15 NHLRC4 GNG13 FBXL16 METTL26 RHBDL1 NARFL PRR35 RAB40C MSLN WDR90 PRR25
nsv457311 Chr.16:681725 - 761746 on Build GRCh38 Loss METRN HAGHL FAM173A STUB1 WDR24 JMJD8 NARFL MSLN FBXL16 CCDC78
nsv952898 Chr.16:495001 - 1132900 on Build GRCh38 Deletion METRN LOC100287175 C1QTNF8 STUB1 LMF1-AS1 WDR24 LOC107984876 LOC105371038 MIR5587 LMF1 LOC101929280 CCDC78 LOC105371184 LOC107987233 MIR3176 RHOT2 PIGQ RPUSD1 LINC00235 MIR662 MCRIP2 RAB11FIP3 WFIKKN1 HAGHL FAM173A JMJD8 SSTR5-AS1 CHTF18 CAPN15 NHLRC4 GNG13 FBXL16 METTL26 SOX8 RHBDL1 NARFL PRR35 RAB40C SSTR5 MSLN WDR90 PRR25
nsv571012 Chr.16:583354 - 748489 on Build GRCh38 Loss METRN WFIKKN1 HAGHL FAM173A LOC100287175 STUB1 WDR24 JMJD8 LOC105371038 FBXL16 LOC101929280 CCDC78 LOC105371184 METTL26 RHOT2 PIGQ RHBDL1 NARFL RAB40C MCRIP2 WDR90
nsv1160326 Chr.16:580902 - 804689 on Build GRCh38 Duplication METRN LOC100287175 STUB1 WDR24 LOC105371038 LOC101929280 CCDC78 LOC105371184 RHOT2 PIGQ RPUSD1 MIR662 MCRIP2 WFIKKN1 HAGHL FAM173A JMJD8 CHTF18 GNG13 FBXL16 METTL26 RHBDL1 NARFL RAB40C MSLN WDR90
nsv1160325 Chr.16:506925 - 836376 on Build GRCh38 Duplication METRN LOC100287175 STUB1 WDR24 LOC105371038 MIR5587 LOC101929280 CCDC78 LOC105371184 LOC107987233 MIR3176 RHOT2 PIGQ RPUSD1 LINC00235 MIR662 MCRIP2 RAB11FIP3 WFIKKN1 HAGHL FAM173A JMJD8 CHTF18 CAPN15 NHLRC4 GNG13 FBXL16 METTL26 RHBDL1 NARFL PRR35 RAB40C MSLN WDR90 PRR25
nsv516590 Chr.16:605686 - 748489 on Build GRCh38 Loss METRN WFIKKN1 HAGHL FAM173A LOC100287175 STUB1 WDR24 JMJD8 LOC105371038 FBXL16 CCDC78 LOC105371184 METTL26 RHOT2 RHBDL1 NARFL RAB40C MCRIP2 WDR90
nsv571022 Chr.16:718334 - 728820 on Build GRCh38 Loss METRN HAGHL FAM173A CCDC78
nsv471065 Chr.16:629411 - 739761 on Build GRCh38 Gain METRN WFIKKN1 HAGHL FAM173A LOC100287175 STUB1 WDR24 JMJD8 LOC105371038 FBXL16 CCDC78 LOC105371184 METTL26 RHOT2 RHBDL1 NARFL MCRIP2 WDR90
dgv4825n54 Chr.16:661905 - 761746 on Build GRCh38 Loss METRN HAGHL FAM173A STUB1 WDR24 JMJD8 FBXL16 CCDC78 LOC105371184 RHOT2 RHBDL1 NARFL MSLN WDR90
nsv9321 Chr.16:638149 - 804328 on Build GRCh38 Gain+Loss METRN HAGHL FAM173A LOC100287175 STUB1 WDR24 JMJD8 LOC105371038 CHTF18 GNG13 FBXL16 CCDC78 LOC105371184 RHOT2 RHBDL1 RPUSD1 NARFL MIR662 MCRIP2 MSLN WDR90

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Gene Ontology Categories:

Process(es)


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