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See other GGACT CNV Assays ›
Gene Symbol
GGACT
Assay Reference Genome
Location

Chr.13:100530447 on build GRCh38
Cytoband
13q32.3
Assay ID Hs02830953_cn
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Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 87769

Gene Name:

 gamma-glutamylamine cyclotransferase

Gene Aliases:

 A2LD1

Location:

 Chr.13:100530164-100588792 on Build GRCh38

Assay Gene Location:

 Within Exon 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
GGACT NM_001195087.1 3 2380 NP_001182016.1
NM_033110.2 2 2395 NP_149101.1
XM_005254083.2 2 2522 XP_005254140.1
XM_011521129.2 3 5358 XP_011519431.1
XM_017020804.1 3 2496 XP_016876293.1
AK091974.1 3 2068
AK093228.1 1 1611
AK095850.1 3 2380

Target Gene Details

Entrez Gene ID:

 5095

Gene Name:

 propionyl-CoA carboxylase alpha subunit

Gene Aliases:

 -

Location:

 Chr.13:100089015-100530437 on Build GRCh38

Assay Gene Location:

 Overlaps - Exon 33
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PCCA NM_000282.3 NP_000273.2
NM_001127692.2 NP_001121164.1
NM_001178004.1 NP_001171475.1
XM_017020608.1 XP_016876097.1
XM_017020609.1 XP_016876098.1
XM_017020613.1 XP_016876102.1
XM_017020614.1 XP_016876103.1
XM_017020617.1 XP_016876106.1
XM_017020618.1 XP_016876107.1
AF385926.1 AAL66189.1
AK225288.1
AK296771.1
BC000140.2 AAH00140.1
CB851764.1
S79219.1 AAB35181.1
X14608.1 CAA32763.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1037414 Chr.13:100521000 - 100622872 on Build GRCh38 Loss PCCA GGACT TMTC4
esv3582760 Chr.13:100471360 - 100566346 on Build GRCh38 Gain PCCA GGACT PCCA-AS1

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More Information


Additional Information:

For this assay, SNP(s) [rs201062235] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Exonic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

ligase

Gene Ontology Categories:

Function(s) Process(es)


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