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See other CHRNE CNV Assays ›
Gene Symbol
CHRNE
Assay Reference Genome
Location

Chr.17:4898568 on build GRCh38
Cytoband
17p13.2
Assay ID Hs02841483_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 1145

Gene Name:

 cholinergic receptor nicotinic epsilon subunit

Gene Aliases:

 ACHRE, CMS1D, CMS1E, CMS2A, CMS4A, CMS4B, CMS4C, FCCMS, SCCMS

Location:

 Chr.17:4897769-4905019 on Build GRCh38

Assay Gene Location:

 Within Exon 13
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHRNE NM_000080.3 12 1661 NP_000071.1
XM_017024115.1 12 1680 XP_016879604.1
X66403.1 12 1661 CAA47030.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv833350 Chr.17:4884713 - 5060776 on Build GRCh38 Loss MIR6864 LOC101927979 CAMTA2 INCA1 MIR6865 KIF1C SPAG7 RNF167 ENO3 C17orf107 SLC52A1 LOC102724009 SLC25A11 CHRNE GP1BA MINK1 PFN1
esv3572365 Chr.17:4874864 - 4942141 on Build GRCh38 Gain C17orf107 SLC25A11 CHRNE RNF167 GP1BA MINK1
nsv833349 Chr.17:4853631 - 4991300 on Build GRCh38 Loss MIR6864 LOC101927979 CAMTA2 INCA1 MIR6865 SPAG7 RNF167 ENO3 C17orf107 SLC25A11 CHRNE GP1BA MINK1 PFN1
nsv574275 Chr.17:4875192 - 4946479 on Build GRCh38 Gain C17orf107 SLC25A11 CHRNE RNF167 GP1BA MINK1 PFN1
nsv833347 Chr.17:4785297 - 4955981 on Build GRCh38 Loss GLTPD2 RNF167 ENO3 PLD2 C17orf107 SLC25A11 LOC107984973 VMO1 CHRNE PSMB6 GP1BA MINK1 PFN1
dgv3088n100 Chr.17:4868317 - 4942562 on Build GRCh38 Gain C17orf107 SLC25A11 CHRNE RNF167 GP1BA MINK1
nsv509647 Chr.17:4865132 - 4918672 on Build GRCh38 Insertion C17orf107 CHRNE MINK1
nsv574273 Chr.17:4585589 - 5460332 on Build GRCh38 Gain CXCL16 MIR6865 ZMYND15 RABEP1 KIF1C SPAG7 ALOX15 RNF167 PLD2 C1QBP LOC102724009 SLC25A11 LOC107984973 TM4SF5 PELP1 VMO1 CHRNE PSMB6 LOC400568 DHX33 GP1BA LOC101928000 MINK1 SCIMP MIR6864 LOC101927979 CAMTA2 ZNF594 INCA1 ZFP3 GLTPD2 USP6 ENO3 NUP88 LOC100130950 C17orf107 SLC52A1 MED11 LOC101559451 ARRB2 SMTNL2 ZNF232 RPAIN PFN1

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