Hs02844777_cn

• Gene Symbol: RAB40B
• Assay Reference Genome Location: Chr.17:82657619 on build GRCh38
• Cytoband: 17q25.3

Target Gene Details

• Entrez Gene ID: 10966
• Gene Name: RAB40B, member RAS oncogene family
• Gene Aliases: RAR, SEC4L
• Location: Chr.17:82657067-82698722 on Build GRCh38
• Assay Gene Location: Within Exon 10

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
RAB40B	NM_006822.2	6	1207	NP_006813.1
	XM_005256334.4	6	1410	XP_005256391.1
	XM_006722271.3	6	976	XP_006722334.1
	XM_011523528.2	6	1329	XP_011521830.1
	XM_017024042.1	7	1842	XP_016879531.1
	XM_017024043.1	6	1319	XP_016879532.1
	AB209711.1			BAD92948.1
	AK095782.1	1	1971
	AK124376.1	2	1823
	BC018039.1	6	1207	AAH18039.1
	U05227.1	6	1126	AAA17031.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1067553	Chr.17:82530808 - 83091923 on Build GRCh38	Loss	MIR4525 FOXK2 WDR45B B3GNTL1 RAB40B FN3K ZNF750 METRNL LOC105376791 FN3KRP TBCD LOC105371944 LOC101929552
nsv1067362	Chr.17:82569201 - 82681793 on Build GRCh38	Gain	MIR4525 FOXK2 WDR45B RAB40B
nsv1062980	Chr.17:82408938 - 82687942 on Build GRCh38	Gain	MIR4525 FOXK2 WDR45B OGFOD3 RAB40B C17orf62 HEXDC NARF
nsv428351	Chr.17:81152631 - 83064073 on Build GRCh38	Gain	MIR4525 MIR3186 MIR6787 MAFG ALYREF TSPAN10 FN3K MRPL12 SLC16A3 LRRC45 ZNF750 PYCR1 ARHGDIA ACTG1 TBCD MAFG-AS1 AATK-AS1 CCDC137 LOC105371944 C17orf62 SECTM1 GPS1 PCYT2 MYADML2 UTS2R CCDC57 RAB40B FAAP100 LINC00482 ANAPC11 TEPSIN NARF LOC105376791 FN3KRP NPB AATK PDE6G NPLOC4 OXLD1 CEP131 FOXK2 NOTUM P4HB WDR45B SNORD134 LOC105376790 B3GNTL1 ASPSCR1 BAHCC1 DUS1L GCGR MIR6786 TMEM105 RAC3 SLC25A10 LOC101929552 STRA13 FASN CD7 HGS ARL16 DCXR LOC101929511 LOC100130370 TEX19 MIR4740 PPP1R27 C17orf89 RFNG MCRIP1 OGFOD3 FSCN2 SLC38A10 CSNK1D LOC105371925 SIRT7 HEXDC
esv2762577	Chr.17:82244836 - 82838431 on Build GRCh38	Gain+Loss	MIR4525 FOXK2 CD7 WDR45B UTS2R LOC105376790 RAB40B FN3K ZNF750 LOC101929511 TEX19 NARF LOC105376791 FN3KRP TBCD OGFOD3 CSNK1D C17orf62 SECTM1 HEXDC LOC101929552
esv21913	Chr.17:81828123 - 83103548 on Build GRCh38	Gain+Loss	MIR4525 MIR6787 MAFG ALYREF FN3K SLC16A3 LRRC45 ZNF750 PYCR1 ARHGDIA TBCD MAFG-AS1 LOC105371944 C17orf62 SECTM1 GPS1 PCYT2 MYADML2 UTS2R CCDC57 RAB40B ANAPC11 NARF LOC105376791 FN3KRP NPB FOXK2 NOTUM P4HB WDR45B SNORD134 LOC105376790 B3GNTL1 ASPSCR1 DUS1L RAC3 LOC101929552 STRA13 FASN CD7 DCXR LOC101929511 TEX19 METRNL PPP1R27 RFNG MCRIP1 OGFOD3 CSNK1D SIRT7 HEXDC

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

small GTPase mediated signal transduction
protein ubiquitination
symbiont intracellular protein transport in host

Function(s)

GTP binding