Hs02869896_cn

• Gene Symbol: FCHSD1
• Assay Reference Genome Location: Chr.5:141641084 on build GRCh38
• Cytoband: 5q31.3

Target Gene Details

• Entrez Gene ID: 89848
• Gene Name: FCH and double SH3 domains 1
• Gene Aliases: NWK2
• Location: Chr.5:141639302-141651453 on Build GRCh38
• Assay Gene Location: Within Exon 21

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
FCHSD1	NM_033449.2	20	2538	NP_258260.1
	XM_005268524.4	20	2565	XP_005268581.1
	XM_006714803.3	19	2442	XP_006714866.1
	XM_011537698.2	19	2483	XP_011536000.1
	AF086518.1	1	330
	AK000007.1	20	2522
	AK027281.1	1	529
	AK126203.1	2	1400
	AY217346.1	20	2538	AAO45099.1
	AY358478.1	11	2156	AAQ88842.1
	BC047016.1	19	2480	AAH47016.1

Target Gene Details

• Entrez Gene ID: 285613
• Gene Name: RELT like 2
• Gene Aliases: C5orf16
• Location: Chr.5:141636946-141641077 on Build GRCh38
• Assay Gene Location: Overlaps - Exon 5

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
RELL2	NM_001130029.1			NP_001123501.1
	NM_173828.4			NP_776189.3
	XM_005268414.3			XP_005268471.1
	XM_011537624.1			XP_011535926.1
	XM_011537625.2			XP_011535927.1
	AK054889.1
	AK075064.1			BAC11380.1
	AY358163.1			AAQ88530.1
	BC063469.1			AAH63469.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1154058	Chr.5:141632251 - 142199943 on Build GRCh38	Deletion	LOC729080 GNPDA1 RNF14 PCDH1 NDFIP1 ARAP3 PCDH12 KIAA0141 FCHSD1 RELL2 HDAC3

More Information

• Set Membership: Intragenic, Exonic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

positive regulation of cell-substrate adhesion

Function(s)

protein binding
collagen binding