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See other CDC42BPG CNV Assays ›
Gene Symbol
CDC42BPG
Assay Reference Genome
Location

Chr.11:64836154 on build GRCh38
Cytoband
11q13.1
Assay ID Hs02874686_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 55561

Gene Name:

 CDC42 binding protein kinase gamma

Gene Aliases:

 DMPK2, HSMDPKIN, KAPPA-200, MRCKG, MRCKgamma

Location:

 Chr.11:64823809-64844685 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 14 - Exon 14
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CDC42BPG NM_017525.2 NP_059995.2
XM_011545155.2 XP_011543457.1
XM_011545156.2 XP_011543458.1
XM_011545157.2 XP_011543459.1
XM_011545158.2 XP_011543460.1
XM_011545159.2 XP_011543461.1
XM_011545160.2 XP_011543462.1
XM_011545161.2 XP_011543463.1
XM_017017996.1 XP_016873485.1
XM_017017997.1 XP_016873486.1
XM_017017998.1 XP_016873487.1
XM_017017999.1 XP_016873488.1
AY648038.1 AAT67172.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv555207 Chr.11:64832530 - 64853046 on Build GRCh38 Loss CDC42BPG EHD1
nsv528506 Chr.11:64577976 - 64933558 on Build GRCh38 Loss MIR192 RASGRP2 EHD1 PPP2R5B SLC22A12 MIR6749 NRXN2 SF1 CDC42BPG MIR194-2HG MIR6750 ATG2A MAP4K2 MIR194-2 MEN1 PYGM
nsv469962 Chr.11:64759608 - 64854101 on Build GRCh38 Loss CDC42BPG MAP4K2 EHD1 MEN1 SF1 PYGM
nsv951013 Chr.11:64777329 - 64847128 on Build GRCh38 Deletion CDC42BPG MAP4K2 MEN1 SF1
nsv832189 Chr.11:64719711 - 64852727 on Build GRCh38 Loss CDC42BPG MAP4K2 RASGRP2 EHD1 MEN1 NRXN2 SF1 PYGM

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More Information


Additional Information:

For this assay, SNP(s) [rs73494273] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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