Hs02876674_cn

• Gene Symbol: YTHDF1
• Assay Reference Genome Location: Chr.20:63195858 on build GRCh38
• Cytoband: 20q13.33

Target Gene Details

• Entrez Gene ID: 54915
• Gene Name: YTH N6-methyladenosine RNA binding protein 1
• Gene Aliases: C20orf21
• Location: Chr.20:63195429-63216186 on Build GRCh38
• Assay Gene Location: Within Exon 5

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
YTHDF1	NM_017798.3	5	2824	NP_060268.2
	AB055518.1	2	2165	BAB62751.1
	AK000398.1	3	1985	BAA91138.1
	AK024546.1	1	337
	AK095795.1	5	2542
	AL834366.1	2	1945	CAD39029.1
	BC003681.1	4	2498	AAH03681.1
	BC016920.2	2	2241	AAH16920.2
	BC050284.1	5	2824	AAH50284.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv519n27	Chr.20:63154307 - 63248817 on Build GRCh38	Loss	NKAIN4 YTHDF1 LOC107985425 MIR124-3 BIRC7 MIR3196
nsv953306	Chr.20:63151949 - 63571247 on Build GRCh38	Deletion	NKAIN4 LOC102723788 KCNQ2 SRMS BIRC7 ARFGAP1 PTK6 CHRNA4 MIR4326 COL20A1 YTHDF1 LOC107985425 LOC100130152 FNDC11 FLJ16779 LOC100130587 MIR124-3 EEF1A2 HELZ2 PPDPF MIR3196
dgv68n68	Chr.20:63076461 - 63224595 on Build GRCh38	Loss	HAR1B LOC63930 YTHDF1 HAR1A MIR124-3
nsv586559	Chr.20:63195172 - 63248817 on Build GRCh38	Gain	NKAIN4 YTHDF1 LOC107985425 BIRC7 MIR3196
nsv828798	Chr.20:63194266 - 63202129 on Build GRCh38	Loss	YTHDF1
nsv9825	Chr.20:62775470 - 63601330 on Build GRCh38	Gain	OGFR-AS1 DPH3P1 GID8 NKAIN4 LOC102723788 SLC17A9 BIRC7 OGFR ARFGAP1 PTK6 CHRNA4 LOC63930 BHLHE23 LOC107985428 YTHDF1 LOC107985425 FNDC11 LOC100130587 HAR1A EEF1A2 LINC00029 HAR1B DIDO1 KCNQ2 SRMS TCFL5 MIR4326 LINC01056 MRGBP COL9A3 COL20A1 LOC100130152 FLJ16779 MIR124-3 HELZ2 LINC00659 PPDPF GMEB2 MIR3196
nsv834031	Chr.20:63132252 - 63245925 on Build GRCh38	Loss	NKAIN4 YTHDF1 LOC107985425 MIR124-3 BIRC7 MIR3196
esv2722892	Chr.20:63194513 - 63197931 on Build GRCh38	Deletion	YTHDF1

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

positive regulation of translational initiation

Function(s)

ribosome binding
poly(A) RNA binding
N6-methyladenosine-containing RNA binding