Genomic Map
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Target Gene Details
Entrez Gene ID: | 782 |
Gene Name: | calcium voltage-gated channel auxiliary subunit beta 1 |
Gene Aliases: |
CAB1, CACNLB1, CCHLB1 |
Location: |
Chr.17:39173456-39197703 on Build GRCh38 |
Assay Gene Location: | Within Exon 18 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| CACNB1 | NM_000723.4 | 14 | 2873 | NP_000714.3 |
| XM_005257645.2 | 14 | 2943 | XP_005257702.1 | |
| XM_006722072.2 | 13 | 2674 | XP_006722135.1 | |
| XM_017025024.1 | 14 | 2813 | XP_016880513.1 | |
| XM_017025025.1 | 13 | 2539 | XP_016880514.1 | |
| XM_017025026.1 | 13 | 2704 | XP_016880515.1 | |
| XM_017025027.1 | 13 | 2766 | XP_016880516.1 | |
| XM_017025028.1 | 14 | 3232 | XP_016880517.1 | |
| XM_017025029.1 | 14 | 2724 | XP_016880518.1 | |
| AB054985.1 | 14 | 2826 | BAB21444.1 | |
| AB209176.1 | 12 | 4784 | BAD92413.1 | |
| AK127283.1 | 12 | 3552 | ||
| BC037311.1 | 14 | 2810 | AAH37311.2 | |
| M92303.1 | 14 | 2814 | AAA35633.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv833440 | Chr.17:39033205 - 39210437 on Build GRCh38 | Loss |
 ARL5C
PLXDC1
LOC100131347
CACNB1
LRRC37A11P
RPL19
|
| esv3893012 | Chr.17:39172813 - 39177990 on Build GRCh38 | Loss |
CACNB1
|
| nsv833441 | Chr.17:39164554 - 39320543 on Build GRCh38 | Loss |
ARL5C
FBXL20
STAC2
LOC101929578
CACNB1
RPL19
|
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Additional Information:
For this assay, SNP(s) [rs79702560] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic
Exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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