Hs02880509_cn

• Gene Symbol: TMEM220
• Assay Reference Genome Location: Chr.17:10715045 on build GRCh38
• Cytoband: 17p13.1

Target Gene Details

• Entrez Gene ID: 388335
• Gene Name: transmembrane protein 220
• Gene Aliases: -
• Location: Chr.17:10711084-10730329 on Build GRCh38
• Assay Gene Location: Within Exon 6

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TMEM220	NM_001004313.1	6	1369	NP_001004313.1
	XM_005256634.4	5	1304	XP_005256691.1
	XM_011523835.2	5	853	XP_011522137.1
	XM_011523836.2	4	1245	XP_011522138.1
	XM_017024616.1			XP_016880105.1
	XM_017024617.1			XP_016880106.1
	AK289624.1	6	1025
	AK295928.1	5	1034
	AY550194.1	6	1369	AAS57719.1
	BC136838.1	6	935
	BC136840.1	6	935

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv2675560	Chr.17:10710661 - 10748164 on Build GRCh38	Deletion	TMEM220-AS1 TMEM220 MAGOH2P ADPRM
nsv1065819	Chr.17:10622619 - 10784575 on Build GRCh38	Gain	TMEM220-AS1 MYH3 MYHAS SCO1 TMEM220 MAGOH2P ADPRM
esv3639941	Chr.17:10710674 - 10748133 on Build GRCh38	Loss	TMEM220-AS1 TMEM220 MAGOH2P ADPRM
nsv1063900	Chr.17:10662646 - 10729182 on Build GRCh38	Gain	MYH3 SCO1 TMEM220 MAGOH2P ADPRM
nsv833367	Chr.17:10683841 - 10826633 on Build GRCh38	Loss	TMEM220-AS1 SCO1 LINC00675 TMEM220 MAGOH2P PIRT ADPRM
nsv1058835	Chr.17:10322963 - 10939602 on Build GRCh38	Loss	MYH4 MYH8 MYH13 SCO1 LINC00675 TMEM220-AS1 MYH3 MYHAS MYH2 MYH1 TMEM220 MAGOH2P PIRT ADPRM

More Information

Additional Information:

For this assay, SNP(s) [rs73974829] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Exonic, DGV Variation