Hs02881739_cn

• Gene Symbol: SEC24D
• Assay Reference Genome Location: Chr.4:118723291 on build GRCh38
• Cytoband: 4q26

Target Gene Details

• Entrez Gene ID: 9871
• Gene Name: SEC24 homolog D, COPII coat complex component
• Gene Aliases: CLCRP2
• Location: Chr.4:118722823-118838683 on Build GRCh38
• Assay Gene Location: Within Exon 25

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SEC24D	NM_001318066.1	23	3623	NP_001304995.1
	NM_014822.3	23	3620	NP_055637.2
	XM_005263379.2	23	3497	XP_005263436.1
	XM_017008875.1	18	2778	XP_016864364.1
	AB018298.1	23	3523
	AK001390.1	20	2991
	AK125962.1	18	3455
	AK291765.1
	AK309960.1	16	2359
	BC035761.1	23	3545	AAH35761.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv2759279	Chr.4:117557693 - 118753587 on Build GRCh38	Gain	SNHG8 CEP170P1 PRSS12 SNORA24 SEC24D LOC729218 LINC01378 METTL14 NDST3 LOC101929741
nsv519017	Chr.4:117907652 - 118850326 on Build GRCh38	Loss	SNHG8 CEP170P1 PRSS12 SNORA24 SEC24D LOC729218 METTL14 NDST3 LOC101929741

More Information

Additional Information:

For this assay, SNP(s) [rs79586191] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

vesicle coat protein

Gene Ontology Categories:

Process(es)

in utero embryonic development
antigen processing and presentation of peptide antigen via MHC class I
intracellular protein transport
ER to Golgi vesicle-mediated transport
antigen processing and presentation of exogenous peptide antigen via MHC class II
COPII vesicle coating

Function(s)

molecular_function
protein binding
zinc ion binding