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See other LOC102724058 CNV Assays ›
Gene Symbol
LOC102724058
Assay Reference Genome
Location

Chr.2:165991588 on build GRCh38
Cytoband
2q24.3
Assay ID Hs02882159_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 102724058

Gene Name:

 uncharacterized LOC102724058

Gene Aliases:

 -

Location:

 Chr.2:165957418-166036400 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LOC102724058 NR_110598.1
HY008183.1
HY011842.1
HY029566.1

Target Gene Details

Entrez Gene ID:

 6323

Gene Name:

 sodium voltage-gated channel alpha subunit 1

Gene Aliases:

 EIEE6, FEB3, FEB3A, FHM3, GEFSP2, HBSCI, NAC1, Nav1.1, SCN1, SMEI

Location:

 Chr.2:165989160-166149216 on Build GRCh38

Assay Gene Location:

 Within Exon 30
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SCN1A NM_001165963.1 26 5705 NP_001159435.1
NM_001165964.1 26 5621 NP_001159436.1
NM_001202435.1 28 5914 NP_001189364.1
NM_006920.4 26 5672 NP_008851.3
XM_011511602.2 27 5981 XP_011509904.1
XM_011511604.2 27 5841 XP_011509906.1
XM_011511605.2 28 6045 XP_011509907.1
XM_011511606.2 28 5989 XP_011509908.1
XM_017004644.1 29 6160 XP_016860133.1
XM_017004645.1 28 6048 XP_016860134.1
XM_017004646.1 27 5962 XP_016860135.1
XM_017004647.1 29 6134 XP_016860136.1
XM_017004648.1 28 5911 XP_016860137.1
XM_017004649.1 27 5873 XP_016860138.1
XM_017004650.1 27 5947 XP_016860139.1
XM_017004651.1 28 5852 XP_016860140.1
XM_017004652.1 27 5892 XP_016860141.1
XM_017004653.1 28 5999 XP_016860142.1
XM_017004654.1 28 6080 XP_016860143.1
AB093548.1 26 5687 BAC21101.1
AB093549.1 26 5654 BAC21102.1
AB098335.1 26 5603 BAC45228.1
AF225985.1 26 5675 AAK00217.1
AK293759.1 2 963
AK294900.1 6 1448
AY043484.1 26 5654 AAK95360.1
M91803.1 3 1136
X65362.1 3 1136 CAA46439.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv961904 Chr.2:165991129 - 165992860 on Build GRCh38 Duplication SCN1A LOC102724058
nsv834445 Chr.2:165800387 - 165995152 on Build GRCh38 Gain+Loss SCN1A TTC21B-AS1 TTC21B LOC102724058 LOC100506124

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