Hs02911522_cn

• Gene Symbol: YTHDF1
• Assay Reference Genome Location: Chr.20:63213884 on build GRCh38
• Cytoband: 20q13.33

Target Gene Details

• Entrez Gene ID: 54915
• Gene Name: YTH N6-methyladenosine RNA binding protein 1
• Gene Aliases: C20orf21
• Location: Chr.20:63195429-63216186 on Build GRCh38
• Assay Gene Location: Overlaps Intron 3 - Exon 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
YTHDF1	NM_017798.3			NP_060268.2
	AK095795.1
	BC003681.1			AAH03681.1
	BC050284.1			AAH50284.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv519n27	Chr.20:63154307 - 63248817 on Build GRCh38	Loss	YTHDF1 BIRC7 MIR3196 NKAIN4 MIR124-3 LOC107985425
nsv953306	Chr.20:63151949 - 63571247 on Build GRCh38	Deletion	MIR4326 ARFGAP1 LOC102723788 FLJ16779 BIRC7 COL20A1 SRMS MIR3196 NKAIN4 PPDPF KCNQ2 CHRNA4 LOC107985425 PTK6 LOC100130587 YTHDF1 EEF1A2 LOC100130152 FNDC11 HELZ2 MIR124-3
dgv68n68	Chr.20:63076461 - 63224595 on Build GRCh38	Loss	YTHDF1 HAR1B MIR124-3 LOC63930 HAR1A
nsv586559	Chr.20:63195172 - 63248817 on Build GRCh38	Gain	YTHDF1 BIRC7 MIR3196 NKAIN4 LOC107985425
nsv9825	Chr.20:62775470 - 63601330 on Build GRCh38	Gain	MIR4326 TCFL5 MRGBP SLC17A9 LINC00029 SRMS GID8 PPDPF KCNQ2 LINC00659 PTK6 LOC100130587 GMEB2 EEF1A2 DIDO1 ARFGAP1 LOC102723788 FLJ16779 BIRC7 COL20A1 OGFR HAR1B MIR3196 NKAIN4 LOC63930 HAR1A CHRNA4 LOC107985425 OGFR-AS1 YTHDF1 COL9A3 LOC107985428 BHLHE23 DPH3P1 LOC100130152 FNDC11 HELZ2 LINC01056 MIR124-3
nsv834031	Chr.20:63132252 - 63245925 on Build GRCh38	Loss	YTHDF1 BIRC7 MIR3196 NKAIN4 MIR124-3 LOC107985425
nsv527884	Chr.20:63208233 - 63221277 on Build GRCh38	Loss	YTHDF1

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

positive regulation of translational initiation

Function(s)

ribosome binding
poly(A) RNA binding
N6-methyladenosine-containing RNA binding