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See other TAF1C CNV Assays ›
Gene Symbol
TAF1C
Assay Reference Genome
Location

Chr.16:84178810 on build GRCh38
Cytoband
16q24.1
Assay ID Hs02914997_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 9013

Gene Name:

 TATA-box binding protein associated factor, RNA polymerase I subunit C

Gene Aliases:

 MGC:39976, SL1, TAFI110, TAFI95

Location:

 Chr.16:84177847-84187070 on Build GRCh38

Assay Gene Location:

 Within Exon 14
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TAF1C NM_001243156.1 15 2905 NP_001230085.1
NM_001243157.1 12 2539 NP_001230086.1
NM_001243158.1 11 2400 NP_001230087.1
NM_001243159.1 14 2872 NP_001230088.1
NM_001243160.1 12 2717 NP_001230089.1
NM_005679.3 14 2983 NP_005670.3
NM_139353.2 15 2741 NP_647610.2
XM_005256226.3 14 2906 XP_005256283.1
XM_005256227.3 14 2817 XP_005256284.1
XM_006721325.3 15 2998 XP_006721388.1
XM_006721326.3 16 2920 XP_006721389.1
XM_017023845.1 15 2828 XP_016879334.1
XM_017023846.1 13 2767 XP_016879335.1
XM_017023847.1 15 2739 XP_016879336.1
XM_017023848.1 9 2590 XP_016879337.1
AB209594.1 13 3681 BAD92831.1
AK097031.1 12 2686
AK299060.1
AK299347.1 15 2876
AK304261.1 14 2854
AK315982.1
BC028131.1 15 2720 AAH28131.1
L39059.1 14 2925 AAA62861.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3639413 Chr.16:84172318 - 84253359 on Build GRCh38 Loss DNAAF1 ADAD2 KCNG4 TAF1C
nsv833309 Chr.16:84076867 - 84248591 on Build GRCh38 Loss DNAAF1 ADAD2 MBTPS1 KCNG4 HSDL1 LOC729887 TAF1C
nsv1065790 Chr.16:83830329 - 84243597 on Build GRCh38 Loss DNAAF1 MLYCD OSGIN1 SLC38A8 ADAD2 MBTPS1 KCNG4 HSDL1 NECAB2 LOC105371371 LOC729887 TAF1C
esv2761930 Chr.16:84007420 - 84312461 on Build GRCh38 Gain LOC105376777 DNAAF1 SLC38A8 ADAD2 MBTPS1 KCNG4 HSDL1 WFDC1 LOC729887 TAF1C
nsv518331 Chr.16:84176132 - 84179104 on Build GRCh38 Loss DNAAF1 TAF1C
esv3639414 Chr.16:84176251 - 84352273 on Build GRCh38 Loss LOC105376777 DNAAF1 ADAD2 KCNG4 WFDC1 TAF1C
esv3639412 Chr.16:84170074 - 84221406 on Build GRCh38 Loss DNAAF1 ADAD2 KCNG4 TAF1C
nsv573422 Chr.16:84178502 - 84180359 on Build GRCh38 Loss DNAAF1 TAF1C
nsv483044 Chr.16:84166395 - 87066394 on Build GRCh38 Gain LOC105376777 DNAAF1 MIR5093 USP10 TLDC1 LOC440390 EMC8 LINC00917 TAF1C LOC105371374 KLHL36 LINC01082 MIR1910 FOXL1 LOC101928474 FENDRR COX4I1 WFDC1 FOXF1 FOXC2-AS1 GINS2 IRF8 LINC00311 LOC400548 C16orf74 LOC102724344 LOC101928614 LOC101928557 FOXC2 ADAD2 LINC01081 MIR6774 LOC146513 ATP2C2 KIAA0513 FLJ30679 FAM92B COTL1 MTHFSD ZDHHC7 CRISPLD2 GSE1 KCNG4
nsv1059227 Chr.16:84029323 - 84233403 on Build GRCh38 Loss DNAAF1 SLC38A8 ADAD2 MBTPS1 KCNG4 HSDL1 LOC729887 TAF1C

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