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See other HAGHL CNV Assays ›
Gene Symbol
HAGHL
Assay Reference Genome
Location

Chr.16:729541 on build GRCh38
Cytoband
16p13.3
Assay ID Hs02919884_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 84264

Gene Name:

 hydroxyacylglutathione hydrolase-like

Gene Aliases:

 -

Location:

 Chr.16:726936-729746 on Build GRCh38

Assay Gene Location:

 Within Exon 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
HAGHL NM_001290137.1 9 1167 NP_001277066.1
NM_001290139.1 9 1237 NP_001277068.1
NM_001323635.1 9 1272 NP_001310564.1
NM_001323636.1 8 1192 NP_001310565.1
NM_032304.3 8 1198 NP_115680.1
XM_005255632.1 8 1405 XP_005255689.1
XM_011522712.1 8 1429 XP_011521014.1
XM_017023774.1 8 1261 XP_016879263.1
AA489499.1 1 160
AK054841.1 6 1493 BAB70814.1
AK098340.1 3 2025
AW136334.1 1 192
BC004353.1 8 1173 AAH04353.1
BC015008.1 8 1126 AAH15008.1
BC033796.1 7 1527 AAH33796.1
BI834617.1 4 503
BQ067068.1 4 485
BX090134.1 1 189

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv516590 Chr.16:605686 - 748489 on Build GRCh38 Loss WFIKKN1 STUB1 WDR90 LOC100287175 LOC105371184 MCRIP2 HAGHL FAM173A LOC105371038 RHOT2 FBXL16 WDR24 RAB40C JMJD8 CCDC78 METTL26 NARFL METRN RHBDL1
nsv471065 Chr.16:629411 - 739761 on Build GRCh38 Gain WFIKKN1 STUB1 WDR90 LOC100287175 LOC105371184 MCRIP2 HAGHL FAM173A LOC105371038 RHOT2 FBXL16 WDR24 JMJD8 CCDC78 METTL26 NARFL METRN RHBDL1
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication POLR3K NDUFB10 GNPTG MRPS34 MIR4717 PDIA2 TPSB2 PRR35 FAM173A SNHG9 RGS11 IGFALS E4F1 LOC105371047 METTL26 ATP6V0C MIR6768 LOC105371049 TMEM204 BAIAP3 LOC107987233 C16orf91 LINC00235 GNG13 RNPS1 FAHD1 SNORA10 GFER LOC105371046 CACNA1H WDR24 LOC107984876 RAB40C CCNF SNRNP25 CASKIN1 MIR4516 SSTR5 EME2 HBA2 TPSAB1 RPS2 LMF1-AS1 NME3 ARHGDIG RPL3L LOC105371184 MIR6859-4 SYNGR3 MIR940 MLST8 DNASE1L2 PTX4 PKD1 MIR3677 LOC729652 KCTD5 TELO2 MAPK8IP3 CAPN15 UNKL MEIOB WASIR2 LOC106660606 SPSB3 PRSS29P TBL3 MIR3176 NOXO1 HAGHL SSTR5-AS1 NTN3 PIGQ LOC100134368 TPSD1 HAGH LOC101929280 LOC652276 PRSS27 METRN CCDC154 RHBDL1 ERVK13-1 NPRL3 UBE2I RPUSD1 STUB1 PGP NME4 MIR5587 LOC105371038 TSR3 NPW CLCN7 FLJ42627 JMJD8 SLC9A3R2 AXIN1 MIR662 NARFL ABCA17P C16orf59 SNORA64 PRR25 NHLRC4 MIR1225 TSC2 CEMP1 MIR3180-5 BRICD5 LINC00254 LOC100287175 RPL23AP5 RAB26 SNORA78 LOC105371045 ZNF598 ABCA3 MSRB1 HBQ1 HBM RNF151 LUC7L DDX11L10 PDPK1 HBA1 WFIKKN1 FAM234A WDR90 HN1L MCRIP2 TBC1D24 RHOT2 FBXL16 LMF1 MRPL28 MPG HBZ TPSG1 MIR3177 C1QTNF8 HS3ST6 SNHG19 DECR2 MIR6767 TRAF7 NUBP2 AMDHD2 IFT140 TMEM8A MIR6511B1 CRAMP1 SOX8 MIR3178 RHBDF1 CCDC78 CHTF18 ECI1 MSLN SNORD60 RAB11FIP3 NTHL1
dgv4825n54 Chr.16:661905 - 761746 on Build GRCh38 Loss STUB1 WDR90 LOC105371184 HAGHL FAM173A RHOT2 FBXL16 WDR24 JMJD8 CCDC78 NARFL MSLN METRN RHBDL1
nsv9321 Chr.16:638149 - 804328 on Build GRCh38 Gain+Loss RPUSD1 STUB1 WDR90 LOC100287175 LOC105371184 MCRIP2 HAGHL FAM173A LOC105371038 RHOT2 FBXL16 WDR24 JMJD8 CCDC78 CHTF18 MIR662 NARFL MSLN METRN RHBDL1 GNG13
nsv471063 Chr.16:520623 - 852322 on Build GRCh38 Loss WFIKKN1 RPUSD1 STUB1 WDR90 PRR35 LOC105371184 MCRIP2 MIR5587 FAM173A LOC105371038 RHOT2 FBXL16 JMJD8 MIR662 METTL26 NARFL LOC107987233 PRR25 NHLRC4 CAPN15 LINC00235 GNG13 MIR3176 LOC100287175 HAGHL PIGQ WDR24 RAB40C LOC101929280 CCDC78 CHTF18 MSLN METRN RHBDL1 RAB11FIP3
nsv457311 Chr.16:681725 - 761746 on Build GRCh38 Loss STUB1 NARFL MSLN METRN HAGHL FAM173A FBXL16 WDR24 JMJD8 CCDC78
nsv526903 Chr.16:451362 - 810673 on Build GRCh38 Loss WFIKKN1 RPUSD1 STUB1 WDR90 PRR35 LOC105371184 MCRIP2 MIR5587 FAM173A LOC105371038 RHOT2 FBXL16 JMJD8 MIR662 METTL26 NARFL LOC107987233 PRR25 NHLRC4 CAPN15 LINC00235 GNG13 MIR3176 LOC100287175 HAGHL PIGQ WDR24 RAB40C LOC101929280 CCDC78 CHTF18 MSLN METRN RHBDL1 RAB11FIP3
nsv952898 Chr.16:495001 - 1132900 on Build GRCh38 Deletion LMF1-AS1 WFIKKN1 RPUSD1 STUB1 WDR90 PRR35 LOC105371184 MCRIP2 MIR5587 FAM173A LOC105371038 RHOT2 FBXL16 LMF1 JMJD8 MIR662 METTL26 NARFL C1QTNF8 LOC107987233 PRR25 NHLRC4 CAPN15 LINC00235 GNG13 MIR3176 LOC100287175 SOX8 HAGHL SSTR5-AS1 PIGQ WDR24 LOC107984876 RAB40C LOC101929280 CCDC78 CHTF18 MSLN METRN SSTR5 RHBDL1 RAB11FIP3
nsv571012 Chr.16:583354 - 748489 on Build GRCh38 Loss WFIKKN1 STUB1 WDR90 LOC100287175 LOC105371184 MCRIP2 HAGHL PIGQ FAM173A LOC105371038 RHOT2 FBXL16 WDR24 RAB40C JMJD8 LOC101929280 CCDC78 METTL26 NARFL METRN RHBDL1
nsv1160326 Chr.16:580902 - 804689 on Build GRCh38 Duplication WFIKKN1 RPUSD1 STUB1 WDR90 LOC105371184 MCRIP2 FAM173A LOC105371038 RHOT2 FBXL16 JMJD8 MIR662 METTL26 NARFL GNG13 LOC100287175 HAGHL PIGQ WDR24 RAB40C LOC101929280 CCDC78 CHTF18 MSLN METRN RHBDL1
nsv1160325 Chr.16:506925 - 836376 on Build GRCh38 Duplication WFIKKN1 RPUSD1 STUB1 WDR90 PRR35 LOC105371184 MCRIP2 MIR5587 FAM173A LOC105371038 RHOT2 FBXL16 JMJD8 MIR662 METTL26 NARFL LOC107987233 PRR25 NHLRC4 CAPN15 LINC00235 GNG13 MIR3176 LOC100287175 HAGHL PIGQ WDR24 RAB40C LOC101929280 CCDC78 CHTF18 MSLN METRN RHBDL1 RAB11FIP3

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Gene Ontology Categories:

Process(es)


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