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See other TPGS1 CNV Assays ›
Gene Symbol
TPGS1
Assay Reference Genome
Location

Chr.19:507777 on build GRCh38
Cytoband
19p13.3
Assay ID Hs02939322_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 91978

Gene Name:

 tubulin polyglutamylase complex subunit 1

Gene Aliases:

 C19orf20, GTRGEO22, PGs1

Location:

 Chr.19:507497-519654 on Build GRCh38

Assay Gene Location:

 Within Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TPGS1 NM_033513.2 1 281 NP_277048.2
AK125401.1 1 278
AK126170.1 1 281 BAC86469.1
BC009520.1 1 167 AAH09520.1
BM846833.1 1 281

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv516566 Chr.19:495722 - 525739 on Build GRCh38 Gain TPGS1 MADCAM1
esv3574264 Chr.19:490245 - 516350 on Build GRCh38 Gain TPGS1 ODF3L2 MADCAM1
nsv509712 Chr.19:391096 - 558643 on Build GRCh38 Insertion GZMM SHC2 TPGS1 C2CD4C ODF3L2 MADCAM1 CDC34
dgv6155n54 Chr.19:404077 - 519032 on Build GRCh38 Loss SHC2 TPGS1 C2CD4C ODF3L2 MADCAM1
nsv428360 Chr.19:232069 - 702131 on Build GRCh38 Gain GZMM SHC2 PRSS57 THEG C2CD4C FSTL3 LOC101929060 MADCAM1 BSG CDC34 PLPP2 RNF126 HCN2 MIER2 TPGS1 ODF3L2 POLRMT FGF22
dgv6166n54 Chr.19:507731 - 520131 on Build GRCh38 Gain TPGS1
dgv1013e212 Chr.19:416231 - 521269 on Build GRCh38 Gain SHC2 TPGS1 ODF3L2 MADCAM1
esv33417 Chr.19:474104 - 518906 on Build GRCh38 Gain+Loss TPGS1 ODF3L2 MADCAM1
nsv577978 Chr.19:294526 - 782854 on Build GRCh38 Gain GZMM MISP SHC2 PRSS57 THEG C2CD4C FSTL3 LOC101929060 MADCAM1 BSG CDC34 RNF126 HCN2 MIER2 TPGS1 PALM ODF3L2 POLRMT FGF22 LOC101928450
nsv953938 Chr.19:355801 - 1104501 on Build GRCh38 Deletion GZMM MISP SHC2 PRSS57 RNU6-2 PRTN3 C2CD4C PTBP1 MADCAM1 BSG AZU1 KISS1R CDC34 ABCA7 R3HDM4 TMEM259 ODF3L2 MIR4745 ARID3A CNN2 WDR18 POLRMT FGF22 PLPPR3 LOC101928450 MED16 MIR3187 THEG FSTL3 ELANE ARHGAP45 GRIN3B RNF126 HCN2 LOC105372235 TPGS1 PALM GPX4 RNU6-9 POLR2E CFD
nsv470101 Chr.19:401714 - 1008505 on Build GRCh38 Loss GZMM MISP SHC2 PRSS57 PRTN3 C2CD4C PTBP1 MADCAM1 BSG AZU1 KISS1R CDC34 R3HDM4 ODF3L2 MIR4745 ARID3A WDR18 POLRMT FGF22 PLPPR3 LOC101928450 MED16 MIR3187 FSTL3 ELANE GRIN3B RNF126 HCN2 LOC105372235 TPGS1 PALM RNU6-9 CFD
esv28250 Chr.19:470703 - 521323 on Build GRCh38 Gain+Loss TPGS1 ODF3L2 MADCAM1

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