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See other TCF19 CNV Assays ›
Gene Symbol
TCF19
Assay Reference Genome
Location

Chr.6:31161995 on build GRCh38
Cytoband
6p21.33
Assay ID Hs02942827_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 6941

Gene Name:

 transcription factor 19

Gene Aliases:

 SC1, TCF-19

Location:

 Chr.6:31158524-31164215 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 3 - Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TCF19 NM_001077511.1 NP_001070979.1
NM_001318908.1 NP_001305837.1
NM_007109.2 NP_009040.2
AK315258.1
BC002493.2 AAH02493.1
BC033086.1 AAH33086.1
BC044632.1 AAH44632.1
BP365938.1
BT007247.1 AAP35911.1
BX647174.1
S53374.1 AAB19475.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv525933 Chr.6:31113428 - 31174468 on Build GRCh38 Loss CCHCR1 PSORS1C2 CDSN PSORS1C3 TCF19 POU5F1 PSORS1C1
nsv1074389 Chr.6:29116522 - 31446623 on Build GRCh38 Deletion ZFP57 ABCF1 CDSN PRR3 TRIM31 OR5V1 PPP1R10 GNL1 OR11A1 HLA-B MOG C6orf15 HLA-F IFITM4P RPP21 SFTA2 HCG27 TRIM31-AS1 OR12D3 VARS2 HCG22 HLA-C MDC1-AS1 MIR4640 HCG18 HLA-E MAS1L HCG4 TRIM39-RPP21 OR2J2 TUBB LOC105375014 PPP1R11 HLA-H OR2H1 DPCR1 HCG8 DHX16 HLA-L PSORS1C1 CCHCR1 HCG4B PSORS1C3 DDR1 ZNRD1 PPP1R18 MUC21 HLA-F-AS1 OR12D2 TRIM15 FLOT1 HCG17 LINC00243 HLA-A RNF39 SNORD32B OR2H2 C6orf136 IER3 PSORS1C2 GTF2H4 TCF19 ATAT1 UBD TRIM40 MUC22 POU5F1 HCG20 HCG9 LOC554223 TRIM10 MIR877 LINC01015 TRIM26 GABBR1 LOC101929006 ZNRD1ASP OR14J1 MICA OR10C1 MDC1 HLA-J TRIM39 HLA-G MIR6891 HLA-K MRPS18B NRM
nsv524061 Chr.6:31139310 - 31166166 on Build GRCh38 Loss CCHCR1 PSORS1C2 TCF19 POU5F1 PSORS1C1
esv2759414 Chr.6:31060513 - 31574531 on Build GRCh38 Gain+Loss CCHCR1 CDSN PSORS1C3 DDX39B SNORD117 HCG26 HLA-B C6orf15 ATP6V1G2-DDX39B MICB PSORS1C2 SNORD84 TCF19 POU5F1 HCG27 HLA-C ATP6V1G2 LTA LOC102725068 MICA LOC100287329 DDX39B-AS1 MCCD1 HCP5 MIR6891 NFKBIL1 PSORS1C1
nsv601481 Chr.6:30454855 - 31316476 on Build GRCh38 Loss CCHCR1 ABCF1 CDSN PSORS1C3 PRR3 PPP1R10 DDR1 PPP1R18 MUC21 FLOT1 LINC00243 GNL1 C6orf136 C6orf15 IER3 PSORS1C2 GTF2H4 TCF19 ATAT1 SFTA2 MUC22 POU5F1 HCG20 HCG27 VARS2 HCG22 HLA-C MIR877 MDC1-AS1 MIR4640 HLA-E MDC1 TUBB LOC105375014 DPCR1 MRPS18B NRM DHX16 PSORS1C1
nsv1122126 Chr.6:28628023 - 31244023 on Build GRCh38 Deletion ZFP57 ABCF1 TRIM27 CDSN PRR3 TRIM31 OR5V1 PPP1R10 HCG16 GNL1 OR11A1 MOG C6orf15 HLA-F IFITM4P HCG14 RPP21 SFTA2 HCG27 TRIM31-AS1 OR12D3 VARS2 HCG22 MDC1-AS1 MIR4640 HCG18 HLA-E MAS1L HCG4 TRIM39-RPP21 OR2J2 TUBB LOC105375014 LINC00533 PPP1R11 HLA-H OR2H1 DPCR1 HCG8 DHX16 HLA-L PSORS1C1 CCHCR1 HCG4B PSORS1C3 OR2J3 DDR1 ZNRD1 PPP1R18 MUC21 HLA-F-AS1 OR12D2 TRIM15 FLOT1 HCG17 LINC00243 HLA-A RNF39 SNORD32B OR2H2 C6orf136 IER3 LINC01556 PSORS1C2 GTF2H4 ZNF311 TCF19 ATAT1 UBD TRIM40 MUC22 POU5F1 HCG20 HCG9 LOC554223 TRIM10 MIR877 LINC01015 TRIM26 GABBR1 LOC101929006 ZNRD1ASP OR14J1 OR10C1 MDC1 HLA-J LINC01623 TRIM39 OR2B3 HLA-G LOC100129636 HLA-K MRPS18B NRM OR2W1
nsv1144137 Chr.6:29720323 - 31338123 on Build GRCh38 Deletion ABCF1 CDSN PRR3 TRIM31 PPP1R10 GNL1 C6orf15 HLA-F IFITM4P RPP21 SFTA2 HCG27 TRIM31-AS1 VARS2 HCG22 HLA-C MDC1-AS1 MIR4640 HCG18 HLA-E HCG4 TRIM39-RPP21 TUBB LOC105375014 PPP1R11 HLA-H DPCR1 HCG8 DHX16 HLA-L PSORS1C1 CCHCR1 HCG4B PSORS1C3 DDR1 ZNRD1 PPP1R18 MUC21 HLA-F-AS1 TRIM15 FLOT1 HCG17 LINC00243 HLA-A RNF39 C6orf136 IER3 PSORS1C2 GTF2H4 TCF19 ATAT1 TRIM40 MUC22 POU5F1 HCG20 HCG9 LOC554223 TRIM10 MIR877 TRIM26 ZNRD1ASP MDC1 HLA-J TRIM39 HLA-G HLA-K MRPS18B NRM
dgv1174e214 Chr.6:31139843 - 31176217 on Build GRCh38 Gain CCHCR1 PSORS1C3 TCF19 POU5F1 PSORS1C1
esv2731791 Chr.6:30404802 - 31346410 on Build GRCh38 Deletion CCHCR1 ABCF1 CDSN PSORS1C3 PRR3 PPP1R10 DDR1 PPP1R18 MUC21 FLOT1 LINC00243 GNL1 C6orf136 C6orf15 IER3 PSORS1C2 GTF2H4 TCF19 ATAT1 SFTA2 MUC22 POU5F1 HCG20 HCG27 VARS2 HCG22 HLA-C MIR877 MDC1-AS1 MIR4640 HLA-E MDC1 TUBB LOC105375014 DPCR1 MRPS18B NRM DHX16 PSORS1C1
nsv601264 Chr.6:29883666 - 31320716 on Build GRCh38 Loss ABCF1 CDSN PRR3 TRIM31 PPP1R10 GNL1 C6orf15 RPP21 SFTA2 HCG27 TRIM31-AS1 VARS2 HCG22 HLA-C MDC1-AS1 MIR4640 HCG18 HLA-E TRIM39-RPP21 TUBB LOC105375014 PPP1R11 HLA-H DPCR1 HCG8 DHX16 HLA-L PSORS1C1 CCHCR1 HCG4B PSORS1C3 DDR1 ZNRD1 PPP1R18 MUC21 TRIM15 FLOT1 HCG17 LINC00243 HLA-A RNF39 C6orf136 IER3 PSORS1C2 GTF2H4 TCF19 ATAT1 TRIM40 MUC22 POU5F1 HCG20 HCG9 TRIM10 MIR877 TRIM26 ZNRD1ASP MDC1 HLA-J TRIM39 HLA-K MRPS18B NRM
esv3411275 Chr.6:29981607 - 31490616 on Build GRCh38 Duplication ABCF1 CDSN PRR3 TRIM31 PPP1R10 HCG26 GNL1 HLA-B C6orf15 RPP21 SFTA2 HCG27 TRIM31-AS1 VARS2 HCG22 HLA-C MDC1-AS1 MIR4640 HCG18 HLA-E TRIM39-RPP21 TUBB LOC105375014 PPP1R11 DPCR1 HCP5 HCG8 DHX16 HLA-L PSORS1C1 CCHCR1 PSORS1C3 DDR1 ZNRD1 PPP1R18 MUC21 TRIM15 FLOT1 HCG17 LINC00243 RNF39 C6orf136 IER3 PSORS1C2 GTF2H4 TCF19 ATAT1 TRIM40 MUC22 POU5F1 HCG20 TRIM10 MIR877 TRIM26 ZNRD1ASP LOC102725068 MICA MDC1 HLA-J TRIM39 MIR6891 MRPS18B NRM

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