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See other CYC1 CNV Assays ›
Gene Symbol
CYC1
Assay Reference Genome
Location

Chr.8:144096763 on build GRCh38
Cytoband
8q24.3
Assay ID Hs02943467_cn
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Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 1537

Gene Name:

 cytochrome c1

Gene Aliases:

 MC3DN6, UQCR4

Location:

 Chr.8:144095035-144097527 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 4 - Intron 4
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CYC1 NM_001916.4 NP_001907.2
XM_017013102.1 XP_016868591.1
AK026633.1
AK225796.1
BC001006.1 AAH01006.1
BC015616.2 AAH15616.1
BC020566.1 AAH20566.1
BC024650.1 AAH24650.1
BQ574597.1
BT019798.1 AAV38601.1
CR541674.1 CAG46475.1
M16597.1 AAA35730.1
X06994.1 CAA30052.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2759651 Chr.8:144076281 - 144230741 on Build GRCh38 Gain MROH1 GPAA1 MIR6847 MAF1 WDR97 SHARPIN EXOSC4 HGH1 CYC1
nsv470249 Chr.8:143889098 - 144519234 on Build GRCh38 Loss HSF1 ADCK5 PPP1R16A MIR6849 SMPD5 PARP10 HGH1 MIR939 SLC39A4 DGAT1 GRINA LOC101928953 MIR6848 FOXH1 MFSD3 VPS28 LRRC14 TMEM249 MROH1 SCX MIR6847 LOC101928902 RECQL4 WDR97 GPT EXOSC4 PLEC MIR6846 MIR661 GPAA1 MIR1234 MAF1 CYHR1 CPSF1 OPLAH BOP1 SHARPIN KIFC2 SCRT1 SLC52A2 MIR6893 TONSL-AS1 SPATC1 FBXL6 TONSL MIR7112 CYC1
nsv612914 Chr.8:143972494 - 144120626 on Build GRCh38 Loss MIR6847 WDR97 SMPD5 EXOSC4 PLEC PARP10 MIR6846 GPAA1 GRINA MAF1 OPLAH SHARPIN SPATC1 CYC1
nsv950015 Chr.8:143866633 - 144125597 on Build GRCh38 Deletion MIR6847 WDR97 SMPD5 EXOSC4 PLEC PARP10 MIR6846 MIR661 EPPK1 GPAA1 GRINA MAF1 OPLAH SHARPIN SPATC1 CYC1
nsv1025071 Chr.8:144044224 - 144300847 on Build GRCh38 Gain MROH1 SCX MIR6847 HSF1 WDR97 SMPD5 EXOSC4 HGH1 MIR6846 GPAA1 MAF1 OPLAH BOP1 SHARPIN SPATC1 MIR7112 CYC1
esv2738050 Chr.8:144096770 - 144096923 on Build GRCh38 Deletion CYC1
esv29971 Chr.8:144068526 - 144172197 on Build GRCh38 Loss MROH1 GPAA1 MIR6847 MAF1 WDR97 SHARPIN EXOSC4 HGH1 CYC1
nsv612915 Chr.8:144007080 - 144224185 on Build GRCh38 Loss MROH1 MIR6847 WDR97 SMPD5 EXOSC4 HGH1 MIR6846 GPAA1 MAF1 OPLAH SHARPIN SPATC1 CYC1
nsv515809 Chr.8:143904439 - 144519234 on Build GRCh38 Gain+Loss HSF1 ADCK5 PPP1R16A MIR6849 SMPD5 PARP10 HGH1 MIR939 SLC39A4 DGAT1 GRINA LOC101928953 MIR6848 FOXH1 MFSD3 VPS28 LRRC14 TMEM249 MROH1 SCX MIR6847 LOC101928902 RECQL4 WDR97 GPT EXOSC4 PLEC MIR6846 MIR661 GPAA1 MIR1234 MAF1 CYHR1 CPSF1 OPLAH BOP1 SHARPIN KIFC2 SCRT1 SLC52A2 MIR6893 TONSL-AS1 SPATC1 FBXL6 TONSL MIR7112 CYC1
dgv12431n54 Chr.8:143845100 - 144161320 on Build GRCh38 Loss MROH1 MIR6847 WDR97 SMPD5 EXOSC4 PLEC PARP10 HGH1 MIR6846 MIR661 EPPK1 GPAA1 GRINA MAF1 OPLAH SHARPIN SPATC1 CYC1
nsv428208 Chr.8:144041826 - 144722291 on Build GRCh38 Gain HSF1 ADCK5 PPP1R16A MIR6849 SMPD5 HGH1 MIR939 SLC39A4 DGAT1 LOC101928953 MIR6848 FOXH1 MFSD3 ARHGAP39 VPS28 LRRC14 TMEM249 MROH1 SCX MIR6847 LOC101928902 RECQL4 WDR97 GPT EXOSC4 LRRC24 ZNF251 MIR6846 C8orf82 GPAA1 MIR1234 MAF1 CYHR1 CPSF1 OPLAH BOP1 SHARPIN KIFC2 SCRT1 SLC52A2 MIR6893 TONSL-AS1 SPATC1 FBXL6 TONSL MIR7112 CYC1
nsv470250 Chr.8:143917934 - 144097007 on Build GRCh38 Gain GPAA1 MIR6847 GRINA OPLAH SMPD5 EXOSC4 PLEC PARP10 MIR6846 MIR661 SPATC1 CYC1
dgv12433n54 Chr.8:143902404 - 144120626 on Build GRCh38 Gain MIR6847 WDR97 SMPD5 EXOSC4 PLEC PARP10 MIR6846 MIR661 GPAA1 GRINA MAF1 OPLAH SHARPIN SPATC1 CYC1
nsv612907 Chr.8:143917935 - 144097007 on Build GRCh38 Gain+Loss GPAA1 MIR6847 GRINA OPLAH SMPD5 EXOSC4 PLEC PARP10 MIR6846 MIR661 SPATC1 CYC1

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More Information


Additional Information:

For this assay, SNP(s) [rs553839760] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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