Hs02947545_cn

• Gene Symbol: SPRN
• Assay Reference Genome Location: Chr.10:133422022 on build GRCh38
• Cytoband: 10q26.3

Target Gene Details

• Entrez Gene ID: 503542
• Gene Name: shadow of prion protein homolog (zebrafish)
• Gene Aliases: SHADOO, SHO, bA108K14.1
• Location: Chr.10:133420666-133424617 on Build GRCh38
• Assay Gene Location: Within Exon 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SPRN	NM_001012508.3	2	1817	NP_001012526.2
	AK123191.1	1	474
	BC040198.1	2	1777

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv304e212	Chr.10:133419886 - 133586746 on Build GRCh38	Gain	SPRN SYCE1 CYP2E1 SCART1 SPRNP1 MTG1
esv3579239	Chr.10:133420623 - 133563761 on Build GRCh38	Loss	SPRN SYCE1 CYP2E1 SCART1 MTG1
nsv832041	Chr.10:133390168 - 133548869 on Build GRCh38	Gain	SPRN CYP2E1 SCART1 PAOX MTG1
dgv1486n54	Chr.10:133389090 - 133621189 on Build GRCh38	Gain	SPRN SYCE1 CYP2E1 SCART1 PAOX SPRNP1 MTG1
nsv470981	Chr.10:133365107 - 133620799 on Build GRCh38	Gain	SPRN SYCE1 MIR3944 CYP2E1 SCART1 PAOX SPRNP1 ECHS1 MTG1
dgv39n111	Chr.10:133419150 - 133491139 on Build GRCh38	Duplication	SPRN SCART1 MTG1
nsv7631	Chr.10:133388509 - 133573114 on Build GRCh38	Deletion	SPRN SYCE1 CYP2E1 SCART1 PAOX SPRNP1 MTG1
nsv1052904	Chr.10:133298340 - 133769367 on Build GRCh38	Gain	ZNF511 SPRN SYCE1 MIR3944 CYP2E1 SPRNP1 ECHS1 CALY TUBGCP2 PRAP1 SCART1 PAOX MTG1 FRG2B FUOM
nsv528260	Chr.10:132859348 - 133620799 on Build GRCh38	Loss	MIR3944 SPRNP1 LINC01166 CALY VENTX TUBGCP2 LINC01167 PRAP1 MTG1 ZNF511 ADGRA1 SPRN SYCE1 CYP2E1 ECHS1 MIR202 UTF1 MIR202HG ADGRA1-AS1 KNDC1 SCART1 PAOX LINC01168 CFAP46 ADAM8 FUOM
nsv952708	Chr.10:133418497 - 133433196 on Build GRCh38	Deletion	SPRN MTG1
esv2760130	Chr.10:133416215 - 133769379 on Build GRCh38	Gain+Loss	SPRN SYCE1 CYP2E1 SCART1 SPRNP1 MTG1 FRG2B
dgv3e196	Chr.10:133266297 - 133450541 on Build GRCh38	Duplication	ZNF511 SPRN CALY TUBGCP2 PRAP1 MIR3944 PAOX ECHS1 MTG1 ADAM8 FUOM
nsv552589	Chr.10:133257500 - 133563944 on Build GRCh38	Gain	ZNF511 SPRN SYCE1 MIR3944 CYP2E1 ECHS1 CALY TUBGCP2 PRAP1 SCART1 PAOX MTG1 ADAM8 FUOM
dgv1489n54	Chr.10:133412162 - 133527325 on Build GRCh38	Gain	SPRN SCART1 MTG1
dgv999n100	Chr.10:133392850 - 133609571 on Build GRCh38	Gain	SPRN SYCE1 CYP2E1 SCART1 SPRNP1 MTG1
dgv1001n100	Chr.10:133418490 - 133562190 on Build GRCh38	Gain	SPRN SYCE1 CYP2E1 SCART1 MTG1
esv2759793	Chr.10:133030918 - 133619181 on Build GRCh38	Gain+Loss	ZNF511 ADGRA1 SPRN SYCE1 MIR3944 CYP2E1 SPRNP1 ECHS1 MIR202 UTF1 MIR202HG CALY VENTX TUBGCP2 ADGRA1-AS1 PRAP1 KNDC1 SCART1 PAOX MTG1 ADAM8 FUOM
nsv514545	Chr.10:133418554 - 133563882 on Build GRCh38	Gain	SPRN SYCE1 CYP2E1 SCART1 MTG1
nsv1052033	Chr.10:133403671 - 133456451 on Build GRCh38	Gain	SPRN SCART1 MTG1
nsv428243	Chr.10:133245214 - 133767422 on Build GRCh38	Gain	ZNF511 SPRN SYCE1 MIR3944 CYP2E1 SPRNP1 ECHS1 MIR202 MIR202HG CALY TUBGCP2 PRAP1 SCART1 PAOX MTG1 ADAM8 FRG2B FUOM
dgv2e196	Chr.10:133189913 - 133450541 on Build GRCh38	Duplication	ZNF511 SPRN MIR3944 ECHS1 MIR202 UTF1 MIR202HG CALY VENTX TUBGCP2 PRAP1 KNDC1 PAOX MTG1 ADAM8 FUOM
dgv124n27	Chr.10:133404452 - 133470611 on Build GRCh38	Gain	SPRN SCART1 MTG1
dgv35e55	Chr.10:133370615 - 133621047 on Build GRCh38	Gain	SPRN SYCE1 MIR3944 CYP2E1 SCART1 PAOX SPRNP1 ECHS1 MTG1
dgv1487n54	Chr.10:133391295 - 133567238 on Build GRCh38	Gain	SPRN SYCE1 CYP2E1 SCART1 PAOX SPRNP1 MTG1
nsv517180	Chr.10:133402966 - 133620799 on Build GRCh38	Gain+Loss	SPRN SYCE1 CYP2E1 SCART1 SPRNP1 MTG1
esv2750853	Chr.10:133266358 - 133621047 on Build GRCh38	Gain	ZNF511 SPRN SYCE1 MIR3944 CYP2E1 SPRNP1 ECHS1 CALY TUBGCP2 PRAP1 SCART1 PAOX MTG1 ADAM8 FUOM
nsv1043323	Chr.10:133400840 - 133600187 on Build GRCh38	Gain	SPRN SYCE1 CYP2E1 SCART1 SPRNP1 MTG1
nsv469597	Chr.10:133415366 - 133577004 on Build GRCh38	Gain	SPRN SYCE1 CYP2E1 SCART1 SPRNP1 MTG1

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

protein import into nucleus

Function(s)

nucleic acid binding