Hs02961292_cn

• Gene Symbol: GIN1
• Assay Reference Genome Location: Chr.5:103108627 on build GRCh38
• Cytoband: 5q21.1

Target Gene Details

• Entrez Gene ID: 54826
• Gene Name: gypsy retrotransposon integrase 1
• Gene Aliases: GIN-1, TGIN1, ZH2C2
• Location: Chr.5:103086000-103120149 on Build GRCh38
• Assay Gene Location: Within Exon 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
GIN1	NM_001317954.1	2	163	NP_001304883.1
	NM_017676.2	2	163	NP_060146.2
	NR_134299.1	2	163
	XM_005272028.3	2	174	XP_005272085.1
	XM_017009599.1	2	1598	XP_016865088.1
	AK000132.1	2	161	BAA90963.1
	AK225572.1	2	160
	AK295796.1	2	151
	BC015325.1	2	122	AAH15325.1
	BC151135.1	1	103
	BC157835.1	1	103
	CR627424.1	2	134	CAH10511.1
	DB101499.1	2	163

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv830430	Chr.5:102996203 - 103156228 on Build GRCh38	Gain	PAM PPIP5K2 GIN1
nsv1029894	Chr.5:102284375 - 103249595 on Build GRCh38	Gain	LINC00492 SLCO4C1 LINC00491 PAM PPIP5K2 GIN1 SLCO6A1 LOC105379106

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

DNA integration

Function(s)

nucleic acid binding