Hs02972622_cn

• Gene Symbol: OXCT1
• Assay Reference Genome Location: Chr.5:41730301 on build GRCh38
• Cytoband: 5p13.1

Target Gene Details

• Entrez Gene ID: 5019
• Gene Name: 3-oxoacid CoA-transferase 1
• Gene Aliases: OXCT, SCOT
• Location: Chr.5:41730065-41870689 on Build GRCh38
• Assay Gene Location: Within Exon 17

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
OXCT1	NM_000436.3	17	3322	NP_000427.1
	XM_017009494.1	16	3113	XP_016864983.1
	AK125115.1	1	3899
	BC009001.1	17	3046	AAH09001.1
	U62961.1	17	3089	AAB07366.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv3604851	Chr.5:41591779 - 41992753 on Build GRCh38	Gain	OXCT1-AS1 OXCT1 C5orf51 FBXO4
nsv830271	Chr.5:41716425 - 41895608 on Build GRCh38	Loss	OXCT1-AS1 OXCT1

More Information

Additional Information:

For this assay, SNP(s) [rs77675837] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

transferase

Gene Ontology Categories:

Process(es)

brain development
heart development
response to nutrient
response to hormone
response to activity
positive regulation of insulin secretion involved in cellular response to glucose stimulus
ketone catabolic process
response to drug
response to starvation
response to ethanol
cellular ketone body metabolic process
ketone body catabolic process
adipose tissue development

Function(s)

3-oxoacid CoA-transferase activity
protein homodimerization activity