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See other TAF1C CNV Assays ›
Gene Symbol
TAF1C
Assay Reference Genome
Location

Chr.16:84183555 on build GRCh38
Cytoband
16q24.1
Assay ID Hs02975317_cn
Size
Availability Made To Order
Catalog # 4400291
Price 475.00
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441.65
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Assay Details

Target Gene Details

Entrez Gene ID:

 9013

Gene Name:

 TATA-box binding protein associated factor, RNA polymerase I subunit C

Gene Aliases:

 MGC:39976, SL1, TAFI110, TAFI95

Location:

 Chr.16:84177847-84187070 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 4 - Exon 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TAF1C NM_001243156.1 NP_001230085.1
NM_001243157.1 NP_001230086.1
NM_001243158.1 NP_001230087.1
NM_001243159.1 NP_001230088.1
NM_001243160.1 NP_001230089.1
NM_005679.3 NP_005670.3
NM_139353.2 NP_647610.2
XM_005256226.3 XP_005256283.1
XM_005256227.3 XP_005256284.1
XM_006721325.3 XP_006721388.1
XM_006721326.3 XP_006721389.1
XM_017023845.1 XP_016879334.1
XM_017023846.1 XP_016879335.1
XM_017023847.1 XP_016879336.1
XM_017023848.1 XP_016879337.1
AB209594.1 BAD92831.1
AK097031.1
AK299060.1
AK299347.1
AK304261.1
AK304739.1
AK315982.1
AU130229.1
BC028131.1 AAH28131.1
DC376588.1
DC377529.1
L39059.1 AAA62861.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3639413 Chr.16:84172318 - 84253359 on Build GRCh38 Loss DNAAF1 KCNG4 ADAD2 TAF1C
nsv833309 Chr.16:84076867 - 84248591 on Build GRCh38 Loss DNAAF1 LOC729887 KCNG4 ADAD2 HSDL1 TAF1C MBTPS1
nsv1065790 Chr.16:83830329 - 84243597 on Build GRCh38 Loss LOC105371371 SLC38A8 DNAAF1 NECAB2 LOC729887 KCNG4 OSGIN1 ADAD2 MLYCD HSDL1 TAF1C MBTPS1
esv2761930 Chr.16:84007420 - 84312461 on Build GRCh38 Gain LOC105376777 SLC38A8 DNAAF1 WFDC1 LOC729887 KCNG4 ADAD2 HSDL1 TAF1C MBTPS1
nsv523437 Chr.16:84176132 - 84196770 on Build GRCh38 Loss DNAAF1 ADAD2 TAF1C
nsv573423 Chr.16:84179104 - 84190716 on Build GRCh38 Loss TAF1C
esv3639414 Chr.16:84176251 - 84352273 on Build GRCh38 Loss LOC105376777 DNAAF1 WFDC1 KCNG4 ADAD2 TAF1C
nsv457597 Chr.16:84182086 - 84215151 on Build GRCh38 Loss ADAD2 TAF1C
esv3639412 Chr.16:84170074 - 84221406 on Build GRCh38 Loss DNAAF1 KCNG4 ADAD2 TAF1C
nsv483044 Chr.16:84166395 - 87066394 on Build GRCh38 Gain LOC105371374 LOC105376777 MIR1910 LINC00917 ZDHHC7 KLHL36 ATP2C2 LINC01081 FLJ30679 TAF1C CRISPLD2 LOC101928614 KIAA0513 MIR6774 LINC00311 COX4I1 LOC101928557 DNAAF1 LOC440390 TLDC1 KCNG4 LOC400548 EMC8 FAM92B C16orf74 GSE1 USP10 LINC01082 LOC146513 FOXC2-AS1 FOXL1 WFDC1 ADAD2 GINS2 FOXF1 IRF8 MIR5093 LOC102724344 MTHFSD LOC101928474 COTL1 FENDRR FOXC2
nsv1059227 Chr.16:84029323 - 84233403 on Build GRCh38 Loss SLC38A8 DNAAF1 LOC729887 KCNG4 ADAD2 HSDL1 TAF1C MBTPS1

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