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See other STUB1 CNV Assays ›
Gene Symbol
STUB1
Assay Reference Genome
Location

Chr.16:681182 on build GRCh38
Cytoband
16p13.3
Assay ID Hs02982357_cn
Size
Availability Made To Order
Catalog # 4400291
Price 4,505.00
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Assay Details

Target Gene Details

Entrez Gene ID:

 10273

Gene Name:

 STIP1 homology and U-box containing protein 1

Gene Aliases:

 CHIP, HSPABP2, NY-CO-7, SCAR16, SDCCAG7, UBOX1

Location:

 Chr.16:680111-682768 on Build GRCh38

Assay Gene Location:

 Within Exon 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
STUB1 NM_001293197.1 2 694 NP_001280126.1
NM_005861.3 NP_005852.2
AF039689.1 AAC18038.1
AF129085.1 AAD33400.1
AF217968.1 2 581 AAG17211.1
AF432221.1 AAL99927.1
BC007545.1 AAH07545.1
BC017178.1 AAH17178.1
BC022788.1 AAH22788.1
BC063617.1 AAH63617.1
CB145452.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv827480 Chr.16:672775 - 685288 on Build GRCh38 Gain RHBDL1 STUB1 RHOT2 LOC105371184 WDR24 JMJD8
nsv482181 Chr.16:680115 - 682767 on Build GRCh38 Gain STUB1 JMJD8
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication MIR3176 TRAF7 MIR4516 FLJ42627 LOC105371047 LOC105371038 MIR3178 RPL23AP5 RPS2 PDIA2 MIR4717 POLR3K MIR6859-4 SNORA78 PGP SNHG19 NPRL3 LOC729652 CCNF IGFALS LOC100287175 MIR662 TBL3 HS3ST6 C16orf91 SNORA10 HN1L WASIR2 NOXO1 RHOT2 LUC7L CCDC78 RPL3L CASKIN1 GNG13 NHLRC4 CAPN15 SSTR5 SPSB3 TMEM204 MEIOB SNRNP25 MIR3180-5 GNPTG SNORA64 LOC100134368 TPSAB1 MPG MIR1225 LMF1-AS1 MIR6768 AMDHD2 RAB40C IFT140 JMJD8 RAB26 RNPS1 CLCN7 C16orf59 SSTR5-AS1 MSRB1 RGS11 MIR6767 SYNGR3 HAGH LOC105371049 AXIN1 UBE2I LOC106660606 LOC101929280 MIR6511B1 MIR3677 MRPL28 LOC107984876 DDX11L10 FBXL16 SLC9A3R2 MAPK8IP3 LOC105371184 ZNF598 WDR24 TSC2 NME3 SNORD60 MIR5587 HBA2 MIR940 UNKL WFIKKN1 CRAMP1 HBZ C1QTNF8 LINC00254 MLST8 TPSG1 RHBDL1 LOC652276 METTL26 PTX4 PDPK1 ABCA17P HBQ1 E4F1 SNHG9 BAIAP3 MCRIP2 ECI1 STUB1 LOC105371045 PRSS29P PRR25 TPSB2 NDUFB10 ERVK13-1 PRR35 PRSS27 CCDC154 TSR3 FAM173A ATP6V0C HBM RPUSD1 CACNA1H LMF1 LINC00235 METRN TBC1D24 NTN3 MIR3177 NTHL1 PIGQ CEMP1 ARHGDIG NUBP2 RNF151 SOX8 HBA1 NPW DNASE1L2 TELO2 RHBDF1 RAB11FIP3 GFER WDR90 LOC105371046 EME2 LOC107987233 HAGHL BRICD5 KCTD5 TMEM8A DECR2 MSLN PKD1 TPSD1 CHTF18 MRPS34 NARFL NME4 ABCA3 FAM234A FAHD1
nsv471063 Chr.16:520623 - 852322 on Build GRCh38 Loss MIR3176 RPUSD1 MIR5587 LOC105371038 LINC00235 WFIKKN1 METRN PIGQ RHBDL1 METTL26 LOC100287175 MIR662 RAB40C JMJD8 RAB11FIP3 WDR90 MCRIP2 LOC107987233 HAGHL STUB1 RHOT2 CCDC78 PRR25 GNG13 MSLN PRR35 NHLRC4 CAPN15 CHTF18 LOC101929280 FAM173A FBXL16 NARFL LOC105371184 WDR24
nsv526903 Chr.16:451362 - 810673 on Build GRCh38 Loss MIR3176 RPUSD1 MIR5587 LOC105371038 LINC00235 WFIKKN1 METRN PIGQ RHBDL1 METTL26 LOC100287175 MIR662 RAB40C JMJD8 RAB11FIP3 WDR90 MCRIP2 LOC107987233 HAGHL STUB1 RHOT2 CCDC78 PRR25 GNG13 MSLN PRR35 NHLRC4 CAPN15 CHTF18 LOC101929280 FAM173A FBXL16 NARFL LOC105371184 WDR24
nsv952898 Chr.16:495001 - 1132900 on Build GRCh38 Deletion MIR3176 RPUSD1 MIR5587 LOC105371038 LMF1 LMF1-AS1 LINC00235 WFIKKN1 METRN C1QTNF8 PIGQ RHBDL1 METTL26 LOC100287175 MIR662 SOX8 RAB40C JMJD8 RAB11FIP3 WDR90 MCRIP2 SSTR5-AS1 LOC107987233 HAGHL STUB1 RHOT2 CCDC78 PRR25 GNG13 MSLN PRR35 NHLRC4 CAPN15 SSTR5 CHTF18 LOC101929280 FAM173A LOC107984876 FBXL16 NARFL LOC105371184 WDR24
nsv571012 Chr.16:583354 - 748489 on Build GRCh38 Loss WDR90 LOC105371038 MCRIP2 HAGHL STUB1 RHOT2 CCDC78 WFIKKN1 METRN PIGQ RHBDL1 LOC101929280 METTL26 FAM173A LOC100287175 FBXL16 NARFL LOC105371184 RAB40C WDR24 JMJD8
nsv1160326 Chr.16:580902 - 804689 on Build GRCh38 Duplication RPUSD1 LOC105371038 WFIKKN1 METRN PIGQ RHBDL1 METTL26 LOC100287175 MIR662 RAB40C JMJD8 WDR90 MCRIP2 HAGHL STUB1 RHOT2 CCDC78 GNG13 MSLN CHTF18 LOC101929280 FAM173A FBXL16 NARFL LOC105371184 WDR24
nsv1160325 Chr.16:506925 - 836376 on Build GRCh38 Duplication MIR3176 RPUSD1 MIR5587 LOC105371038 LINC00235 WFIKKN1 METRN PIGQ RHBDL1 METTL26 LOC100287175 MIR662 RAB40C JMJD8 RAB11FIP3 WDR90 MCRIP2 LOC107987233 HAGHL STUB1 RHOT2 CCDC78 PRR25 GNG13 MSLN PRR35 NHLRC4 CAPN15 CHTF18 LOC101929280 FAM173A FBXL16 NARFL LOC105371184 WDR24
nsv516590 Chr.16:605686 - 748489 on Build GRCh38 Loss WDR90 LOC105371038 MCRIP2 HAGHL STUB1 RHOT2 CCDC78 WFIKKN1 METRN RHBDL1 METTL26 FAM173A LOC100287175 FBXL16 NARFL LOC105371184 RAB40C WDR24 JMJD8
nsv457310 Chr.16:651656 - 681725 on Build GRCh38 Loss WDR90 RHBDL1 STUB1 RHOT2 LOC105371184 JMJD8
nsv471065 Chr.16:629411 - 739761 on Build GRCh38 Gain WDR90 LOC105371038 MCRIP2 HAGHL STUB1 RHOT2 CCDC78 WFIKKN1 METRN RHBDL1 METTL26 FAM173A LOC100287175 FBXL16 NARFL LOC105371184 WDR24 JMJD8
dgv4825n54 Chr.16:661905 - 761746 on Build GRCh38 Loss WDR90 HAGHL STUB1 RHOT2 CCDC78 METRN MSLN RHBDL1 FAM173A FBXL16 NARFL LOC105371184 WDR24 JMJD8
nsv9321 Chr.16:638149 - 804328 on Build GRCh38 Gain+Loss WDR90 RPUSD1 LOC105371038 MCRIP2 HAGHL STUB1 RHOT2 CCDC78 METRN GNG13 MSLN CHTF18 RHBDL1 FAM173A LOC100287175 MIR662 FBXL16 NARFL LOC105371184 WDR24 JMJD8

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:

Molecular Function -

ubiquitin-protein ligase

Gene Ontology Categories:

Function(s) Process(es)


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