Hs02988212_cn

• Gene Symbol: RAB40B
• Assay Reference Genome Location: Chr.17:82657485 on build GRCh38
• Cytoband: 17q25.3

Target Gene Details

• Entrez Gene ID: 10966
• Gene Name: RAB40B, member RAS oncogene family
• Gene Aliases: RAR, SEC4L
• Location: Chr.17:82657067-82698722 on Build GRCh38
• Assay Gene Location: Within Exon 10

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
RAB40B	NM_006822.2	6	1341	NP_006813.1
	XM_005256334.4	6	1544	XP_005256391.1
	XM_006722271.3	6	1110	XP_006722334.1
	XM_011523528.2	6	1463	XP_011521830.1
	XM_017024042.1	7	1976	XP_016879531.1
	XM_017024043.1	6	1453	XP_016879532.1
	AK095782.1	1	2105
	AK124376.1	2	1957
	BC018039.1	6	1341	AAH18039.1
	U05227.1	6	1260	AAA17031.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1067553	Chr.17:82530808 - 83091923 on Build GRCh38	Loss	MIR4525 FOXK2 TBCD LOC105371944 B3GNTL1 FN3KRP WDR45B FN3K RAB40B ZNF750 LOC101929552 LOC105376791 METRNL
nsv1067362	Chr.17:82569201 - 82681793 on Build GRCh38	Gain	WDR45B RAB40B MIR4525 FOXK2
nsv1062980	Chr.17:82408938 - 82687942 on Build GRCh38	Gain	C17orf62 OGFOD3 WDR45B NARF HEXDC RAB40B MIR4525 FOXK2
nsv428351	Chr.17:81152631 - 83064073 on Build GRCh38	Gain	MIR6787 MIR3186 NPB ANAPC11 ACTG1 PCYT2 UTS2R LOC105371925 C17orf89 NPLOC4 OGFOD3 MRPL12 LOC100130370 TEPSIN CSNK1D FAAP100 SNORD134 P4HB ARHGDIA MAFG-AS1 MIR6786 ALYREF CEP131 PPP1R27 LOC101929511 FN3KRP WDR45B FN3K LRRC45 ZNF750 CCDC57 LOC101929552 RFNG LOC105376791 LOC105376790 C17orf62 NARF PDE6G FSCN2 FOXK2 DCXR ASPSCR1 SLC38A10 SIRT7 STRA13 ARL16 RAB40B SLC25A10 MYADML2 LINC00482 OXLD1 GPS1 CD7 AATK-AS1 TMEM105 TEX19 CCDC137 BAHCC1 HEXDC MIR4525 SECTM1 PYCR1 FASN TBCD RAC3 TSPAN10 HGS LOC105371944 B3GNTL1 MAFG MIR4740 AATK NOTUM MCRIP1 GCGR DUS1L SLC16A3
esv2762577	Chr.17:82244836 - 82838431 on Build GRCh38	Gain+Loss	LOC105376790 CD7 CSNK1D C17orf62 TEX19 NARF HEXDC MIR4525 SECTM1 FOXK2 TBCD UTS2R LOC101929511 OGFOD3 FN3KRP WDR45B FN3K RAB40B ZNF750 LOC101929552 LOC105376791
esv21913	Chr.17:81828123 - 83103548 on Build GRCh38	Gain+Loss	MIR6787 NPB ANAPC11 PCYT2 UTS2R OGFOD3 CSNK1D SNORD134 P4HB ARHGDIA MAFG-AS1 ALYREF PPP1R27 LOC101929511 FN3KRP WDR45B FN3K LRRC45 ZNF750 CCDC57 LOC101929552 RFNG LOC105376791 LOC105376790 C17orf62 NARF FOXK2 DCXR ASPSCR1 SIRT7 STRA13 RAB40B MYADML2 METRNL GPS1 CD7 TEX19 HEXDC MIR4525 SECTM1 PYCR1 FASN TBCD RAC3 LOC105371944 B3GNTL1 MAFG NOTUM MCRIP1 DUS1L SLC16A3

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

small GTPase mediated signal transduction
protein ubiquitination
symbiont intracellular protein transport in host

Function(s)

GTP binding