Hs02991842_cn

• Gene Symbol: SPATC1
• Assay Reference Genome Location: Chr.8:144041355 on build GRCh38
• Cytoband: 8q24.3

Target Gene Details

• Entrez Gene ID: 375686
• Gene Name: spermatogenesis and centriole associated 1
• Gene Aliases: SPATA15
• Location: Chr.8:144010992-144047114 on Build GRCh38
• Assay Gene Location: Overlaps Exon 8 - Intron 8

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SPATC1	NM_001134374.1			NP_001127846.1
	NM_198572.2			NP_940974.2
	XM_011517021.1			XP_011515323.1
	XM_011517022.2			XP_011515324.1
	XM_011517023.2			XP_011515325.1
	XM_011517024.2			XP_011515326.1
	XM_011517025.2			XP_011515327.1
	XM_017013399.1			XP_016868888.1
	AB092352.1			BAD08232.1
	AK301710.1
	BC050390.1			AAH50390.1
	BC053547.1			AAH53547.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv612915	Chr.8:144007080 - 144224185 on Build GRCh38	Loss	SHARPIN HGH1 MIR6846 EXOSC4 WDR97 OPLAH MIR6847 MAF1 SMPD5 GPAA1 SPATC1 CYC1 MROH1
nsv470249	Chr.8:143889098 - 144519234 on Build GRCh38	Loss	SCRT1 SHARPIN MIR6846 MIR939 EXOSC4 MIR1234 WDR97 MIR661 VPS28 PARP10 MAF1 GPT SMPD5 MIR6849 MFSD3 CPSF1 ADCK5 GRINA LOC101928902 SCX LOC101928953 FBXL6 MIR6893 BOP1 CYC1 RECQL4 KIFC2 PPP1R16A HGH1 SLC52A2 SLC39A4 MIR6848 PLEC TONSL-AS1 OPLAH TONSL FOXH1 DGAT1 MIR6847 TMEM249 MIR7112 GPAA1 SPATC1 MROH1 CYHR1 LRRC14 HSF1
nsv6446	Chr.8:144012529 - 144050050 on Build GRCh38	Insertion	SPATC1 SMPD5
nsv515809	Chr.8:143904439 - 144519234 on Build GRCh38	Gain+Loss	SCRT1 SHARPIN MIR6846 MIR939 EXOSC4 MIR1234 WDR97 MIR661 VPS28 PARP10 MAF1 GPT SMPD5 MIR6849 MFSD3 CPSF1 ADCK5 GRINA LOC101928902 SCX LOC101928953 FBXL6 MIR6893 BOP1 CYC1 RECQL4 KIFC2 PPP1R16A HGH1 SLC52A2 SLC39A4 MIR6848 PLEC TONSL-AS1 OPLAH TONSL FOXH1 DGAT1 MIR6847 TMEM249 MIR7112 GPAA1 SPATC1 MROH1 CYHR1 LRRC14 HSF1
nsv612914	Chr.8:143972494 - 144120626 on Build GRCh38	Loss	SHARPIN MIR6846 EXOSC4 PLEC WDR97 OPLAH MIR6847 PARP10 MAF1 SMPD5 GRINA GPAA1 SPATC1 CYC1
dgv12431n54	Chr.8:143845100 - 144161320 on Build GRCh38	Loss	SHARPIN HGH1 MIR6846 EXOSC4 PLEC WDR97 MIR661 OPLAH MIR6847 PARP10 MAF1 SMPD5 EPPK1 GRINA GPAA1 SPATC1 CYC1 MROH1
nsv950015	Chr.8:143866633 - 144125597 on Build GRCh38	Deletion	SHARPIN MIR6846 EXOSC4 PLEC WDR97 MIR661 OPLAH MIR6847 PARP10 MAF1 SMPD5 EPPK1 GRINA GPAA1 SPATC1 CYC1
nsv1161815	Chr.8:143775169 - 144080674 on Build GRCh38	Deletion	MIR6846 LOC642574 EXOSC4 PLEC MIR661 OPLAH SCRIB MIR6847 PARP10 SMPD5 EPPK1 NRBP2 MIR937 GRINA MIR6845 SPATC1 PUF60
nsv470250	Chr.8:143917934 - 144097007 on Build GRCh38	Gain	MIR6846 GRINA EXOSC4 PLEC MIR661 OPLAH GPAA1 SPATC1 CYC1 MIR6847 PARP10 SMPD5
dgv12433n54	Chr.8:143902404 - 144120626 on Build GRCh38	Gain	SHARPIN MIR6846 EXOSC4 PLEC WDR97 MIR661 OPLAH MIR6847 PARP10 MAF1 SMPD5 GRINA GPAA1 SPATC1 CYC1
nsv612906	Chr.8:143917935 - 144090784 on Build GRCh38	Loss	MIR6846 GRINA EXOSC4 PLEC MIR661 OPLAH GPAA1 SPATC1 MIR6847 PARP10 SMPD5

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation