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See other BSG CNV Assays ›
Gene Symbol
BSG
Assay Reference Genome
Location

Chr.19:583091 on build GRCh38
Cytoband
19p13.3
Assay ID Hs03011614_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 682

Gene Name:

 basigin (Ok blood group)

Gene Aliases:

 5F7, CD147, EMMPRIN, OK, TCSF

Location:

 Chr.19:571277-583493 on Build GRCh38

Assay Gene Location:

 Within Exon 10
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
BSG NM_001322243.1 8 1334 NP_001309172.1
NM_001728.3 9 1686 NP_001719.2
NM_198589.2 8 1338 NP_940991.1
NM_198590.2 8 1393 NP_940992.1
NM_198591.2 7 1236 NP_940993.1
XM_017027173.1 9 1571 XP_016882662.1
AF548371.1 9 1565 AAN40694.1
AK095912.1 7 1754
AK296858.1 6 851
AK302231.1 8 1206
AY358113.1 9 1557 AAQ88480.1
BC009040.2 8 1201 AAH09040.1
D45131.1 8 1186 BAA08109.1
GU557064.1 8 1360
GU557065.1 7 1203
L10240.1 8 1171 AAA68936.1
L20471.1 8 1202 AAB41120.1
M87879.1 8 1179 AAA91084.1
X64364.1 8 1214 CAA45716.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv428360 Chr.19:232069 - 702131 on Build GRCh38 Gain MADCAM1 RNF126 PRSS57 LOC101929060 ODF3L2 BSG GZMM MIER2 FGF22 SHC2 HCN2 FSTL3 POLRMT PLPP2 THEG C2CD4C TPGS1 CDC34
nsv577978 Chr.19:294526 - 782854 on Build GRCh38 Gain MADCAM1 RNF126 PRSS57 LOC101929060 ODF3L2 BSG GZMM MIER2 MISP PALM FGF22 SHC2 HCN2 FSTL3 LOC101928450 POLRMT THEG C2CD4C TPGS1 CDC34
nsv953938 Chr.19:355801 - 1104501 on Build GRCh38 Deletion PRSS57 ODF3L2 TMEM259 GZMM CFD PLPPR3 ELANE MISP SHC2 PRTN3 HCN2 LOC101928450 POLRMT RNU6-9 THEG MED16 R3HDM4 TPGS1 RNU6-2 CDC34 ABCA7 LOC105372235 MADCAM1 GPX4 RNF126 CNN2 MIR3187 MIR4745 BSG POLR2E WDR18 PTBP1 ARID3A AZU1 PALM FGF22 FSTL3 GRIN3B KISS1R C2CD4C ARHGAP45
dgv6174n54 Chr.19:579450 - 593319 on Build GRCh38 Loss HCN2 BSG
nsv470101 Chr.19:401714 - 1008505 on Build GRCh38 Loss PRSS57 ODF3L2 GZMM CFD PLPPR3 ELANE MISP SHC2 PRTN3 HCN2 LOC101928450 POLRMT RNU6-9 MED16 R3HDM4 TPGS1 CDC34 LOC105372235 MADCAM1 RNF126 MIR3187 MIR4745 BSG WDR18 PTBP1 ARID3A AZU1 PALM FGF22 FSTL3 GRIN3B KISS1R C2CD4C
nsv578152 Chr.19:572860 - 583812 on Build GRCh38 Gain BSG

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