Hs03014188_cn

• Gene Symbol: CCNF
• Assay Reference Genome Location: Chr.16:2438181 on build GRCh38
• Cytoband: 16p13.3

Target Gene Details

• Entrez Gene ID: 899
• Gene Name: cyclin F
• Gene Aliases: FBX1, FBXO1
• Location: Chr.16:2425438-2458858 on Build GRCh38
• Assay Gene Location: Within Intron 7

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CCNF	NM_001323538.1			NP_001310467.1
	NM_001761.2			NP_001752.2
	XM_017023822.1			XP_016879311.1
	XM_017023823.1			XP_016879312.1
	AB208829.1			BAD92066.1
	AK313371.1
	BC012349.1			AAH12349.1
	U17105.1			AAB60342.1
	Z36714.1			CAA85308.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv2422427	Chr.16:10001 - 2723164 on Build GRCh38	Duplication	CCDC78 MSLN NDUFB10 ABCA3 SNORA64 FAM234A STUB1 RAB11FIP3 RNPS1 SSTR5 LINC00235 HBM LOC106660606 JMJD8 TPSAB1 WDR24 HN1L RPL3L LOC729652 SNORA10 GNPTG IFT140 MRPS34 CCDC154 PRR35 RPL23AP5 RAB26 UNKL TBL3 METRN CHTF18 WFIKKN1 E4F1 HAGH MIR3176 HS3ST6 LMF1 ERVK13-1 CEMP1 MIR4717 PRR25 PRSS27 FAHD1 NTN3 TSC2 TPSG1 MRPL28 MPG RHOT2 BAIAP3 MIR6511B1 BRICD5 TPSD1 LOC100287175 MIR3180-5 HBZ MIR3677 SSTR5-AS1 NOXO1 TSR3 SNHG9 C1QTNF8 ATP6V0C FBXL16 RPUSD1 GNG13 KCTD5 LOC107984876 PDIA2 MIR3177 NME4 METTL26 NPRL3 GFER CRAMP1 MIR940 CLCN7 DNASE1L2 WDR90 RNF151 MCRIP2 LOC105371049 SOX8 DDX11L10 HBA1 CCNF MIR4516 LOC101929280 LOC105371184 LOC100134368 LOC652276 MIR6767 CASKIN1 TRAF7 NPW HAGHL TPSB2 HBQ1 CACNA1H LOC107987233 LOC105371047 NME3 C16orf59 ABCA17P RPS2 FLJ42627 EME2 ZNF598 SNORA78 ECI1 TMEM204 NARFL TBC1D24 WASIR2 PRSS29P LINC00254 TELO2 LOC105371046 LUC7L HBA2 MIR6859-4 AMDHD2 SYNGR3 UBE2I LOC105371045 AXIN1 TMEM8A LOC105371038 C16orf91 NHLRC4 RAB40C LMF1-AS1 RGS11 PDPK1 NUBP2 MIR1225 RHBDF1 PTX4 CAPN15 FAM173A MIR6768 MSRB1 ARHGDIG SNRNP25 MLST8 PIGQ NTHL1 PGP SLC9A3R2 POLR3K DECR2 MEIOB MIR662 MAPK8IP3 IGFALS PKD1 SNHG19 SPSB3 MIR5587 SNORD60 MIR3178 RHBDL1
nsv952903	Chr.16:2423400 - 2476599 on Build GRCh38	Deletion	NTN3 CCNF TBC1D24 MIR6767 MIR6768 LOC729652 C16orf59 ABCA17P
nsv1052260	Chr.16:2074546 - 2629655 on Build GRCh38	Gain	ABCA3 RNPS1 LOC105371049 CEMP1 AMDHD2 MIR4717 LOC106660606 NTN3 CCNF MIR4516 TSC2 LOC652276 MIR6767 CASKIN1 LOC729652 TRAF7 MIR6511B1 BRICD5 MIR3180-5 MIR3677 PDPK1 MIR1225 MIR6768 C16orf59 ABCA17P MLST8 RAB26 PGP ATP6V0C ECI1 TBC1D24 PKD1 SNHG19 MIR940 SNORD60 E4F1 MIR3178 DNASE1L2
nsv833121	Chr.16:2360975 - 2518228 on Build GRCh38	Loss	NTN3 CCNF TBC1D24 MIR6767 MIR6768 LOC729652 C16orf59 ABCA17P ATP6V0C

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

kinase activator

Gene Ontology Categories:

Process(es)

re-entry into mitotic cell cycle
placenta development
mitotic nuclear division
negative regulation of centrosome duplication
protein ubiquitination
SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
cell division

Function(s)

protein binding