Hs03021813_cn

• Gene Symbol: TSPEAR
• Assay Reference Genome Location: Chr.21:44509298 on build GRCh38
• Cytoband: 21q22.3

Target Gene Details

• Entrez Gene ID: 54084
• Gene Name: thrombospondin type laminin G domain and EAR repeats
• Gene Aliases: C21orf29, DFNB98, TSP-EAR
• Location: Chr.21:44497892-44711580 on Build GRCh38
• Assay Gene Location: Within Exon 11

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TSPEAR	NM_001272037.1	11	1783	NP_001258966.1
	NM_144991.2	10	1721	NP_659428.2
	AJ487962.1	10	1721	CAD32309.1
	BC021197.2	10	1610	AAH21197.2
	BC115415.1	8	1247

Target Gene Details

• Entrez Gene ID: 54082
• Gene Name: TSPEAR antisense RNA 1
• Gene Aliases: C21orf31
• Location: Chr.21:44506044-44516575 on Build GRCh38
• Assay Gene Location: Within Exon 5

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TSPEAR-AS1	NR_103707.1	5	1261
	AJ003491.1	3	357
	AJ003549.1	3	343
	AJ003550.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv834109	Chr.21:44449469 - 44510164 on Build GRCh38	Loss	LRRC3 LOC100505727 TSPEAR-AS1 LRRC3-AS1 TSPEAR
nsv953646	Chr.21:44279118 - 44523117 on Build GRCh38	Deletion	PFKL LRRC3 LOC100505727 TSPEAR-AS2 TSPEAR-AS1 TRPM2-AS C21orf2 LRRC3-AS1 TSPEAR AIRE TRPM2
nsv1058359	Chr.21:44304172 - 44547662 on Build GRCh38	Gain	PFKL LRRC3 KRTAP10-1 LOC100505727 TSPEAR-AS2 TSPEAR-AS1 TRPM2-AS C21orf2 LRRC3-AS1 TSPEAR TRPM2
esv2723638	Chr.21:44249174 - 44593709 on Build GRCh38	Deletion	TSPEAR-AS2 TSPEAR-AS1 TRPM2-AS KRTAP10-3 TSPEAR TRPM2 PFKL LRRC3 KRTAP10-1 KRTAP10-4 LOC100505727 LOC105372833 KRTAP10-6 DNMT3L C21orf2 LRRC3-AS1 KRTAP10-2 AIRE KRTAP10-5
nsv1055163	Chr.21:44475780 - 44646211 on Build GRCh38	Gain	TSPEAR-AS2 TSPEAR-AS1 KRTAP10-8 KRTAP10-3 TSPEAR KRTAP10-1 KRTAP10-7 KRTAP10-4 KRTAP10-10 LOC100505727 KRTAP10-6 KRTAP10-2 KRTAP10-5 KRTAP10-9
esv33817	Chr.21:43749531 - 44647625 on Build GRCh38	Loss	TRAPPC10 TSPEAR-AS1 TRPM2-AS AGPAT3 PDXK KRTAP10-3 TSPEAR TRPM2 KRTAP10-11 PFKL KRTAP10-1 KRTAP10-7 KRTAP10-4 ICOSLG DNMT3L C21orf2 LRRC3-AS1 AATBC KRTAP10-2 KRTAP10-9 TSPEAR-AS2 KRTAP10-8 PWP2 CSTB C21orf33 LRRC3 KRTAP10-10 LOC100505727 LOC105372833 KRTAP10-6 RRP1 AIRE KRTAP10-5

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

intercellular signal molecule

Gene Ontology Categories:

Process(es)

sensory perception of sound

Function(s)

molecular_function