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See other LMF1 CNV Assays ›
Gene Symbol
LMF1
Assay Reference Genome
Location

Chr.16:854489 on build GRCh38
Cytoband
16p13.3
Assay ID Hs03030942_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 64788

Gene Name:

 lipase maturation factor 1

Gene Aliases:

 C16orf26, HMFN1876, JFP11, TMEM112, TMEM112A

Location:

 Chr.16:853632-981615 on Build GRCh38

Assay Gene Location:

 Within Exon 22
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LMF1 NM_022773.2 11 1751 NP_073610.2
NR_033645.1 12 1880
NR_033646.1 13 2058
XM_006720928.2 11 2024 XP_006720991.1
XM_006720929.3 12 1905 XP_006720992.1
XM_011522617.2 9 1400 XP_011520919.1
XM_017023576.1 10 1515 XP_016879065.1
XM_017023577.1 12 2180 XP_016879066.1
XM_017023578.1 10 1600 XP_016879067.1
XM_017023579.1 10 1608 XP_016879068.1
XM_017023580.1 13 2330 XP_016879069.1
AB075873.1 BAD38655.1
AK022743.1 11 1749 BAB14218.1
AK025955.1 BAB15295.1
AK093050.1 8 1258
AK125201.1 12 1882
AK225065.1
AK225406.1
AL832177.1
BC010738.1 AAH10738.2
CA427159.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv571046 Chr.16:828324 - 1202441 on Build GRCh38 Gain LMF1-AS1 CACNA1H SOX8 C1QTNF8 LOC107984876 SSTR5-AS1 SSTR5 LMF1
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication MCRIP2 RGS11 PDIA2 MPG RHOT2 MIR6768 MRPS34 AMDHD2 TELO2 WDR24 C1QTNF8 PRR25 LOC106660606 FAM173A MIR940 BRICD5 SNHG9 MIR4717 METRN CCDC154 PTX4 PDPK1 TPSAB1 HAGHL SSTR5-AS1 NARFL CRAMP1 RHBDF1 MIR4516 FBXL16 NHLRC4 RHBDL1 E4F1 ECI1 TRAF7 FLJ42627 NUBP2 NME3 JMJD8 SNORA64 TSC2 LOC100287175 LOC729652 SNORA78 TPSB2 NOXO1 RAB26 SYNGR3 MIR6767 MIR5587 LOC105371047 LUC7L DECR2 GFER NDUFB10 MIR6859-4 WDR90 HN1L C16orf59 MIR3178 IGFALS LOC101929280 LMF1-AS1 FAM234A LOC105371046 MRPL28 CACNA1H RNF151 IFT140 RPL23AP5 METTL26 SNHG19 TBL3 LOC105371049 CCNF LOC105371038 HBA2 TMEM204 LOC100134368 CASKIN1 PGP MIR1225 HBZ MIR662 HS3ST6 PIGQ POLR3K RNPS1 MSLN NPRL3 LINC00254 RAB40C MIR6511B1 WFIKKN1 GNPTG KCTD5 LOC105371045 NTHL1 NME4 LINC00235 MIR3677 EME2 FAHD1 SSTR5 NPW ZNF598 TPSD1 PKD1 ABCA17P PRR35 ERVK13-1 WASIR2 TSR3 RAB11FIP3 AXIN1 MEIOB STUB1 NTN3 DNASE1L2 DDX11L10 CEMP1 LOC652276 UBE2I SNORA10 PRSS29P SOX8 SNORD60 GNG13 HAGH MLST8 ARHGDIG MIR3176 HBM SPSB3 SNRNP25 LMF1 MIR3177 TMEM8A LOC107984876 UNKL MAPK8IP3 LOC105371184 HBQ1 HBA1 LOC107987233 C16orf91 RPL3L BAIAP3 CLCN7 ABCA3 SLC9A3R2 MIR3180-5 MSRB1 CHTF18 TBC1D24 RPUSD1 PRSS27 TPSG1 CCDC78 RPS2 CAPN15 ATP6V0C
esv3637586 Chr.16:798995 - 892120 on Build GRCh38 Loss GNG13 PRR25 LMF1
nsv1704 Chr.16:836423 - 867931 on Build GRCh38 Insertion LMF1
nsv1046349 Chr.16:819378 - 942590 on Build GRCh38 Loss LMF1-AS1 LOC107984876 LMF1
nsv952898 Chr.16:495001 - 1132900 on Build GRCh38 Deletion LOC105371038 STUB1 MIR5587 MCRIP2 RHOT2 MIR662 WDR90 PIGQ SOX8 WDR24 C1QTNF8 GNG13 PRR25 MSLN FAM173A RAB40C LOC101929280 MIR3176 WFIKKN1 METRN LMF1 LMF1-AS1 LINC00235 HAGHL LOC107984876 LOC105371184 LOC107987233 SSTR5-AS1 NARFL SSTR5 FBXL16 NHLRC4 RHBDL1 CHTF18 RPUSD1 METTL26 PRR35 CCDC78 JMJD8 LOC100287175 CAPN15 RAB11FIP3

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