Hs03041017_cn

• Gene Symbol: LRCH4
• Assay Reference Genome Location: Chr.7:100575327 on build GRCh38
• Cytoband: 7q22.1

Target Gene Details

• Entrez Gene ID: 4034
• Gene Name: leucine rich repeats and calponin homology domain containing 4
• Gene Aliases: LRN, LRRN1, LRRN4, PP14183
• Location: Chr.7:100574011-100586188 on Build GRCh38
• Assay Gene Location: Overlaps Intron 17 - Exon 18

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
LRCH4	NM_001289934.1			NP_001276863.1
	NM_002319.4			NP_002310.2
	AF459638.1			AAQ04768.1
	AI491709.1
	AK074833.1
	AK097420.1
	AK128189.1
	BC007634.1			AAH07634.1
	BC018529.1			AAH18529.3

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv607932	Chr.7:100574872 - 100585068 on Build GRCh38	Loss	FBXO24 LRCH4
esv2734888	Chr.7:99975623 - 101290285 on Build GRCh38	Deletion	POP7 SAP25 AP1S1 LOC105375429 MIR93 LAMTOR4 GAL3ST4 MIR6840 PMS2P1 MCM7 COPS6 VGF FIS1 MBLAC1 TFR2 MIR6875 PVRIG EPHB4 PLOD3 AGFG2 ZASP C7orf43 ZCWPW1 AZGP1 TSC22D4 CLDN15 GPC2 MIR25 PILRB MIR4653 ZKSCAN1 ACHE PILRA AP4M1 STAG3 MOSPD3 MIR106B MIR4658 MUC12 GATS MEPCE ACTL6B TAF6 ZNHIT1 ZSCAN21 UFSP1 TRIM56 ZNF3 AZGP1P1 LOC102724094 SRRT ZAN C7orf61 MOGAT3 CNPY4 NAT16 NYAP1 LRCH4 EPO STAG3L5P-PVRIG2P-PILRB GIGYF1 PVRIG2P SPDYE3 MUC3A GNB2 STAG3L5P MUC17 FBXO24 PPP1R35 PCOLCE PCOLCE-AS1 TRIP6 SERPINE1 SLC12A9
nsv951386	Chr.7:100566478 - 100682977 on Build GRCh38	Deletion	SAP25 LOC105375429 MOSPD3 LRCH4 ACTL6B AGFG2 ZASP GIGYF1 GNB2 FBXO24 PCOLCE TFR2 PCOLCE-AS1
nsv831072	Chr.7:100564880 - 100765212 on Build GRCh38	Loss	POP7 SAP25 LOC105375429 MOSPD3 LRCH4 EPO ACTL6B AGFG2 ZASP GIGYF1 GNB2 FBXO24 PCOLCE TFR2 PCOLCE-AS1 ZAN
nsv5868	Chr.7:100572375 - 100617023 on Build GRCh38	Deletion	SAP25 MOSPD3 FBXO24 LRCH4 ZASP PCOLCE PCOLCE-AS1

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

nervous system development

Function(s)

protein binding