Hs03045836_cn

• Gene Symbol: KATNAL2
• Assay Reference Genome Location: Chr.18:47032780 on build GRCh38
• Cytoband: 18q21.1

Target Gene Details

• Entrez Gene ID: 83473
• Gene Name: katanin catalytic subunit A1 like 2
• Gene Aliases: -
• Location: Chr.18:46917602-47104795 on Build GRCh38
• Assay Gene Location: Within Intron 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
KATNAL2	NM_031303.2			NP_112593.2
	XM_005258357.4			XP_005258414.1
	XM_005258358.4			XP_005258415.1
	XM_006722554.3			XP_006722617.1
	XM_011526219.2			XP_011524521.1
	XM_011526220.1			XP_011524522.1
	XM_011526221.2			XP_011524523.1
	XM_011526223.2			XP_011524525.1
	XM_017026028.1			XP_016881517.1
	XM_017026029.1			XP_016881518.1
	XM_017026030.1			XP_016881519.1
	XM_017026032.1			XP_016881521.1
	AK309134.1
	BC034999.2			AAH34999.2

Target Gene Details

• Entrez Gene ID: 51224
• Gene Name: transcription elongation factor B subunit 3B
• Gene Aliases: ELOA2, HsT832, TCEB3L
• Location: Chr.18:47032572-47035617 on Build GRCh38
• Assay Gene Location: Within Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TCEB3B	NM_016427.2	1	2838	NP_057511.2
	AB030834.1	1	2599	BAA90665.1
	BC036022.1	1	2842	AAH36022.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv509693	Chr.18:46942006 - 47047880 on Build GRCh38	Insertion	TCEB3B TCEB3CL LOC107983955 TCEB3C TCEB3CL2 KATNAL2
nsv828225	Chr.18:47032678 - 47033793 on Build GRCh38	Gain	TCEB3B KATNAL2
esv998188	Chr.18:47032741 - 47033895 on Build GRCh38	Gain	TCEB3B KATNAL2
nsv9629	Chr.18:46684730 - 47231140 on Build GRCh38	Gain+Loss	TCEB3B ST8SIA5 SKOR2 TCEB3CL LOC107983955 TCEB3C HDHD2 IER3IP1 PIAS2 TCEB3CL2 KATNAL2
nsv833640	Chr.18:47025905 - 47188501 on Build GRCh38	Loss	TCEB3B TCEB3C HDHD2 IER3IP1 KATNAL2
nsv2284	Chr.18:47024467 - 47043660 on Build GRCh38	Insertion	TCEB3B TCEB3C KATNAL2
nsv1056744	Chr.18:46929089 - 47055381 on Build GRCh38	Gain	TCEB3B TCEB3CL LOC107983955 TCEB3C TCEB3CL2 KATNAL2

More Information

• Set Membership: Intragenic, Exonic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

non-motor microtubule binding protein

Gene Ontology Categories:

Process(es)

cytoplasmic microtubule organization
microtubule severing
transcription from RNA polymerase II promoter
transcription elongation from RNA polymerase II promoter
regulation of DNA-templated transcription, elongation

Function(s)

ATP binding
microtubule binding
microtubule-severing ATPase activity
DNA binding
protein binding