Hs03064523_cn

• Gene Symbol: C9orf24
• Assay Reference Genome Location: Chr.9:34400837 on build GRCh38
• Cytoband: 9p13.3

Target Gene Details

• Entrez Gene ID: 84688
• Gene Name: chromosome 9 open reading frame 24
• Gene Aliases: CBE1, NYD-SP22, SMRP1, bA573M23.4
• Location: Chr.9:34379019-34400833 on Build GRCh38
• Assay Gene Location: Overlaps - Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
C9orf24	XM_005251616.4			XP_005251673.1

Target Gene Details

• Entrez Gene ID: 203259
• Gene Name: family with sequence similarity 219 member A
• Gene Aliases: C9orf25
• Location: Chr.9:34398184-34458610 on Build GRCh38
• Assay Gene Location: Within Exon 8

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
FAM219A	NM_001184940.1	6	992	NP_001171869.1
	NM_001184941.1	6	989	NP_001171870.1
	NM_001184942.1	6	956	NP_001171871.1
	NM_001184943.1	6	938	NP_001171872.1
	NM_001184945.1	6	905	NP_001171874.1
	NM_147202.1	6	941	NP_671735.1
	XM_005251402.4	7	1199	XP_005251459.1
	XM_011517797.2	6	999	XP_011516099.1
	XM_011517798.2	6	948	XP_011516100.1
	XM_011517799.2	6	797	XP_011516101.1
	AK091262.1	2	332
	AK096350.1	6	941
	AK123887.1	7	803
	AK294054.1	6	956
	AK299882.1	6	987
	BC025348.1	2	349	AAH25348.1
	BC041009.2	6	905	AAH41009.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv3620335	Chr.9:33871811 - 34738198 on Build GRCh38	Gain	ENHO CCL21 FAM219A C9orf24 LOC114224 CCL19 CNTFR SIGMAR1 SNORD121A LOC730098 DCTN3 UBAP2 KIAA1161 CCL27 SNORD121B FAM205A DCAF12 GALT NUDT2 UBAP1 KIF24 ARID3C RPP25L IL11RA CNTFR-AS1 UBE2R2 DNAI1
nsv831542	Chr.9:34273805 - 34461547 on Build GRCh38	Gain	FAM219A C9orf24 NUDT2 KIAA1161 KIF24 DNAI1
nsv1015595	Chr.9:34342674 - 34474981 on Build GRCh38	Gain	FAM219A C9orf24 NUDT2 KIAA1161 DNAI1
nsv1028418	Chr.9:34360053 - 34401766 on Build GRCh38	Gain	FAM219A C9orf24 KIAA1161
nsv1016251	Chr.9:34336344 - 34408206 on Build GRCh38	Gain	FAM219A C9orf24 NUDT2 KIAA1161

More Information

• Set Membership: Intragenic, Exonic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

spermatogenesis
cell differentiation
cellular protein complex assembly

Function(s)

protein binding
alpha-tubulin binding