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See other CPT1C CNV Assays ›
Gene Symbol
CPT1C
Assay Reference Genome
Location

Chr.19:49710431 on build GRCh38
Cytoband
19q13.33
Assay ID Hs03066393_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 126129

Gene Name:

 carnitine palmitoyltransferase 1C

Gene Aliases:

 CATL1, CPT1-B, CPT1P, CPTI-B, CPTIC, SPG73

Location:

 Chr.19:49690672-49713731 on Build GRCh38

Assay Gene Location:

 Within Exon 18
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CPT1C NM_001136052.2 15 1961 NP_001129524.1
NM_001199752.2 15 2058 NP_001186681.1
NM_001199753.1 15 1994 NP_001186682.1
NM_152359.2 14 1925 NP_689572.1
NR_108072.1 16 2156
XM_005258505.2 15 2031 XP_005258562.1
XM_005258506.4 14 1947 XP_005258563.1
XM_006723009.3 12 1763 XP_006723072.1
XM_011526438.2 15 2087 XP_011524740.1
XM_011526439.2 15 2151 XP_011524741.1
XM_011526440.2 15 2003 XP_011524742.1
XM_017026265.1 15 2050 XP_016881754.1
XM_017026266.1 15 1971 XP_016881755.1
XM_017026267.1 14 1821 XP_016881756.1
XM_017026268.1 13 1664 XP_016881757.1
XM_017026269.1 13 1774 XP_016881758.1
XM_017026270.1 13 1542 XP_016881759.1
XM_017026271.1 13 1631 XP_016881760.1
XM_017026272.1 14 1858 XP_016881761.1
XM_017026273.1 14 1843 XP_016881762.1
AB208884.1 9 1038 BAD92121.1
AF357970.1 14 1883 AAL99615.1
AK074389.1 7 904 BAB85068.1
AK096516.1 16 2152
AK289713.1 15 2050
AK290092.1 15 1966
AK299866.1 12 1752
AK309087.1 14 1884
AL831876.1 5 556 CAD38561.2
BC029104.1 15 1925 AAH29104.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv469715 Chr.19:49572544 - 49730286 on Build GRCh38 Gain+Loss MIR5088 PRR12 ADM5 PRMT1 PRRG2 NOSIP BCL2L12 IRF3 SCAF1 RRAS CPT1C
nsv833865 Chr.19:49572545 - 49730286 on Build GRCh38 Gain+Loss MIR5088 PRR12 ADM5 PRMT1 PRRG2 NOSIP BCL2L12 IRF3 SCAF1 RRAS CPT1C
nsv9739 Chr.19:47901840 - 50143063 on Build GRCh38 Gain+Loss MIR6800 TSKS PPFIA3 SNORD34 NTF4 PRRG2 SPHK2 IRF3 PTOV1-AS1 LOC101928295 KDELR1 MIR4324 FUT1 CARD8-AS1 SNAR-A14 DHDH FTL SNAR-C2 TMEM143 FAM83E LOC100287477 SNAR-A2 PTOV1 EMP3 SNAR-G1 LIG1 BCAT2 CA11 SNAR-C4 CARD8 MIR6799 CGB2 CGB5 PRMT1 GRWD1 FLJ26850 CCDC114 MIR4749 C19orf68 CGB3 VRK3 CCDC155 RCN3 NUCB1-AS1 PTH2 DBP RUVBL2 SNAR-D IZUMO1 SYNGR4 LOC105372430 SEC1P RPL18 MIR6798 PRR12 LIN7B AKT1S1 SNAR-A1 AP2A1 SNAR-B1 TRPM4 PLA2G4C ATF5 PIH1D1 SNAR-A6 SLC6A16 NOSIP SIGLEC11 GYS1 FUZ TULP2 PLA2G4C-AS1 TBC1D17 SNAR-A4 SNAR-C1 ALDH16A1 SIGLEC16 ELSPBP1 SCAF1 RPS11 SNAR-A12 MED25 MIR5088 SULT2B1 SNAR-A3 FCGRT NTN5 SLC17A7 SNAR-A11 CD37 SNAR-C5 MIR4750 NUCB1 SNAR-A10 HRC CPT1C ZNF473 SNAR-B2 RRAS KCNJ14 SNAR-A7 C19orf73 PLEKHA4 CGB1 MIR4751 SNRNP70 FLT3LG LMTK3 BCL2L12 SPACA4 LOC105447645 BAX DKKL1 SNORD35A HSD17B14 NUP62 SNAR-A5 CGB7 SNORD35B MIR150 BSPH1 FUT2 PPP1R15A FGF21 ADM5 MAMSTR LOC101059948 SNAR-A13 IL4I1 SNORD32A PTOV1-AS2 RASIP1 SNORD33 TEAD2 RPL13A LHB CABP5 PNKP KCNA7 SNAR-A8 CGB8 CYTH2 SNAR-G2 ZNF114 GFY SNAR-A9 SNAR-C3 GRIN2D
nsv817854 Chr.19:49618821 - 49726387 on Build GRCh38 Gain MIR5088 PRR12 ADM5 PRMT1 BCL2L12 IRF3 SCAF1 RRAS CPT1C
nsv953600 Chr.19:49555044 - 49938043 on Build GRCh38 Deletion MIR6800 MED25 TSKS MIR5088 PRRG2 NUP62 IRF3 PTOV1-AS1 PRR12 ADM5 MIR4750 IL4I1 PTOV1-AS2 AKT1S1 PTOV1 CPT1C AP2A1 ATF5 NOSIP RRAS FUZ TBC1D17 PNKP MIR6799 PRMT1 MIR4751 BCL2L12 MIR4749 SCAF1
nsv833864 Chr.19:49551790 - 49733819 on Build GRCh38 Gain MIR5088 PRR12 ADM5 PRMT1 PRRG2 NOSIP BCL2L12 IRF3 SCAF1 RRAS CPT1C
nsv1160655 Chr.19:49489110 - 49841830 on Build GRCh38 Deletion MIR6800 MED25 TSKS MIR5088 SNORD34 SNORD35A FCGRT PRRG2 IRF3 SNORD35B MIR150 PTOV1-AS1 PRR12 ADM5 SNORD32A CPT1C SNORD33 AP2A1 NOSIP RPL13A RRAS FUZ MIR6799 PRMT1 BCL2L12 SCAF1 RPS11 RCN3

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:

Molecular Function -

acyltransferase

Gene Ontology Categories:

Function(s) Process(es)


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