Hs03067708_cn

• Gene Symbol: TRIM23
• Assay Reference Genome Location: Chr.5:65594594 on build GRCh38
• Cytoband: 5q12.3

Target Gene Details

• Entrez Gene ID: 373
• Gene Name: tripartite motif containing 23
• Gene Aliases: ARD1, ARFD1, RNF46
• Location: Chr.5:65589680-65624360 on Build GRCh38
• Assay Gene Location: Overlaps Intron 10 - Exon 11

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TRIM23	NM_001656.3			NP_001647.1
	NM_033227.2			NP_150230.1
	NM_033228.2			NP_150231.1
	XM_005248497.3			XP_005248554.1
	XM_017009444.1			XP_016864933.1
	AF230397.1			AAG50176.1
	AF230398.1			AAG50177.1
	AF230399.1			AAG50178.1
	AK292814.1
	BC022510.1			AAH22510.1
	L04510.1			AAA35940.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv3894204	Chr.5:65586109 - 65714937 on Build GRCh38	Loss	PPWD1 SGTB TRAPPC13 TRIM23

More Information

Additional Information:

For this assay, SNP(s) [rs200591165] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

G-protein

Gene Ontology Categories:

Process(es)

small GTPase mediated signal transduction
viral process
protein ubiquitination
positive regulation of catalytic activity

Function(s)

GTPase activity
ubiquitin-protein transferase activity
protein binding
GTP binding
enzyme activator activity
zinc ion binding
ligase activity
GDP binding
identical protein binding