Hs03080118_cn

• Gene Symbol: FAM189B
• Assay Reference Genome Location: Chr.1:155250684 on build GRCh38
• Cytoband: 1q22

Target Gene Details

• Entrez Gene ID: 10712
• Gene Name: family with sequence similarity 189 member B
• Gene Aliases: C1orf2, COTE1
• Location: Chr.1:155247205-155255483 on Build GRCh38
• Assay Gene Location: Within Exon 9

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
FAM189B	NM_001267608.1	8	1654	NP_001254537.1
	NM_006589.2	9	1708	NP_006580.2
	NM_198264.1	6	1420	NP_937995.1
	XM_005244845.1	9	1705	XP_005244902.1
	AF070550.1	2	184	AAC28638.1
	AL353941.1	4	492
	BC006297.1	1	120	AAH06297.1
	BC006493.2	9	1188	AAH06493.1
	BC007444.2	9	1188	AAH07444.1
	BC008854.2			AAH08854.1
	BC010471.1	9	1612	AAH10471.1
	BC017262.2			AAH17262.1
	BC040136.1	6	897	AAH40136.2

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv831636	Chr.1:155249432 - 155475073 on Build GRCh38	Loss	POU5F1P4 FAM189B RUSC1-AS1 CLK2 LOC105371451 ASH1L PKLR FDPS RUSC1 SCAMP3 MIR555 HCN3
nsv470741	Chr.1:155142784 - 155260340 on Build GRCh38	Loss	THBS3 TRIM46 GBAP1 FAM189B MTX1 MUC1 KRTCAP2 MIR92B SCAMP3 GBA
esv28935	Chr.1:155210698 - 155251452 on Build GRCh38	Gain	GBAP1 FAM189B MTX1 GBA
nsv1011773	Chr.1:155219357 - 155265030 on Build GRCh38	Gain	GBAP1 FAM189B CLK2 SCAMP3 GBA
dgv3n68	Chr.1:155122502 - 155343618 on Build GRCh38	Loss	THBS3 TRIM46 GBAP1 DPM3 FAM189B SLC50A1 ASH1L PKLR MUC1 KRTCAP2 EFNA1 FDPS RUSC1 MIR92B SCAMP3 HCN3 GBA MTX1 RUSC1-AS1 CLK2 LOC105371451

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

biological_process

Function(s)

protein binding
WW domain binding