Hs03333270_cn

• Gene Symbol: MIR200A
• Assay Reference Genome Location: Chr.1:1167900 on build GRCh38
• Cytoband: 1p36.33

Target Gene Details

• Entrez Gene ID: 406983
• Gene Name: microRNA 200a
• Gene Aliases: MIRN200A, mir-200a
• Location: Chr.1:1167863-1167952 on Build GRCh38
• Assay Gene Location: Within Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
MIR200A	NR_029834.1	1	38

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv482937	Chr.1:10001 - 2368561 on Build GRCh38	Loss	PUSL1 CDK11B LOC105378948 SLC35E2B FAAP20 NADK MIR6727 ATAD3A CPTP LOC100132287 ACAP3 TMEM240 LOC105378949 GNB1 OR4F5 ATAD3B AURKAIP1 CPSF3L MORN1 LOC105378591 FAM132A OR4F29 LINC01128 TAS1R3 LOC100129534 LOC100130417 ATAD3C FAM41C SKI TTLL10-AS1 LOC105378589 LOC729737 MIR6859-1 MRPL20 LOC102725121 MIB2 HES4 MIR1302-2 VWA1 MIR6859-2 MMP23A KLHL17 LOC100288175 LOC107985729 PERM1 LOC100288069 LOC148413 B3GALT6 MIR6723 MTND2P28 SSU72 WASH7P TNFRSF18 UBE2J2 AGRN DVL1 SDF4 FAM87B ANKRD65 TTLL10 MIR200B TNFRSF4 ISG15 LOC100506504 TMEM88B MIR429 TMEM52 NOC2L LOC105378947 PLEKHN1 SLC35E2 MMP23B SAMD11 FAM138A LINC01342 LOC100287934 CDK11A PRKCZ CFAP74 FNDC10 CALML6 DDX11L1 LOC100134822 OR4F16 LOC100133331 LOC102724312 C1orf159 LOC101928626 LINC00115 MIR200A MIR6808 LOC107984841 CCNL2 LOC105378592 RNF223 MIR6726 MTND1P23 LOC284600 GABRD LOC107985728 MXRA8 SCNN1D
nsv544954	Chr.1:1139244 - 1186414 on Build GRCh38	Loss	TTLL10 MIR200B LINC01342 MIR200A MIR429 TTLL10-AS1
nsv1003578	Chr.1:1068249 - 1282706 on Build GRCh38	Gain	SDF4 TTLL10 MIR200B TNFRSF4 LOC105378948 MIR429 TTLL10-AS1 RNF223 B3GALT6 C1orf159 LINC01342 TNFRSF18 UBE2J2 FAM132A MIR200A SCNN1D
nsv470680	Chr.1:1070426 - 1378635 on Build GRCh38	Loss	PUSL1 TTLL10-AS1 B3GALT6 MIR6727 C1orf159 TNFRSF18 UBE2J2 CPTP MIR200A ACAP3 DVL1 SDF4 TTLL10 MIR200B TNFRSF4 MIR6808 AURKAIP1 CPSF3L MIR429 RNF223 MIR6726 LINC01342 FAM132A MXRA8 TAS1R3 SCNN1D
nsv1160772	Chr.1:1027585 - 1333467 on Build GRCh38	Duplication	PUSL1 LOC105378948 TTLL10-AS1 B3GALT6 MIR6727 C1orf159 TNFRSF18 UBE2J2 CPTP MIR200A ACAP3 AGRN SDF4 TTLL10 MIR200B TNFRSF4 CPSF3L MIR429 RNF223 MIR6726 LINC01342 FAM132A TAS1R3 LOC100288175 SCNN1D
nsv428334	Chr.1:874371 - 1220569 on Build GRCh38	Gain	LOC100130417 LOC105378948 FAM41C TTLL10-AS1 PERM1 C1orf159 TNFRSF18 MIR200A AGRN HES4 SDF4 TTLL10 MIR200B TNFRSF4 ISG15 MIR429 NOC2L PLEKHN1 RNF223 LOC284600 SAMD11 LOC107985728 KLHL17 LINC01342 LOC100288175
nsv10161	Chr.1:776731 - 1777210 on Build GRCh38	Gain+Loss	PUSL1 LOC107985729 CDK11B LOC105378948 SLC35E2B PERM1 NADK LOC100288069 LOC148413 B3GALT6 SSU72 MIR6727 ATAD3A TNFRSF18 UBE2J2 CPTP ACAP3 AGRN TMEM240 DVL1 SDF4 FAM87B ANKRD65 TTLL10 MIR200B TNFRSF4 ISG15 ATAD3B AURKAIP1 CPSF3L TMEM88B MIR429 NOC2L PLEKHN1 SLC35E2 MMP23B SAMD11 LINC01342 FAM132A LINC01128 TAS1R3 LOC100287934 CDK11A LOC100130417 FNDC10 ATAD3C FAM41C TTLL10-AS1 LOC102724312 C1orf159 MRPL20 LINC00115 MIR200A MIB2 HES4 MIR6808 CCNL2 VWA1 RNF223 MIR6726 LOC284600 MMP23A LOC107985728 KLHL17 MXRA8 LOC100288175 SCNN1D
nsv950452	Chr.1:1106921 - 1637538 on Build GRCh38	Deletion	PUSL1 LOC107985729 FNDC10 CDK11B ATAD3C TTLL10-AS1 LOC148413 B3GALT6 SSU72 MIR6727 LOC102724312 C1orf159 MRPL20 ATAD3A TNFRSF18 UBE2J2 CPTP MIR200A MIB2 ACAP3 TMEM240 DVL1 SDF4 ANKRD65 TTLL10 MIR200B TNFRSF4 MIR6808 CCNL2 ATAD3B VWA1 AURKAIP1 CPSF3L TMEM88B MIR429 MMP23B MIR6726 LINC01342 FAM132A MXRA8 TAS1R3 SCNN1D
nsv517709	Chr.1:817186 - 1275912 on Build GRCh38	Gain+Loss	LOC100130417 LOC105378948 FAM41C TTLL10-AS1 PERM1 B3GALT6 C1orf159 TNFRSF18 UBE2J2 LINC00115 MIR200A AGRN HES4 SDF4 FAM87B TTLL10 MIR200B TNFRSF4 ISG15 MIR429 NOC2L PLEKHN1 RNF223 LOC284600 SAMD11 LOC107985728 KLHL17 LINC01342 FAM132A LINC01128 LOC100288175
nsv1160644	Chr.1:939652 - 1220663 on Build GRCh38	Deletion	SDF4 TTLL10 MIR200B TNFRSF4 ISG15 LOC105378948 MIR429 NOC2L TTLL10-AS1 PLEKHN1 RNF223 PERM1 SAMD11 KLHL17 C1orf159 LINC01342 TNFRSF18 MIR200A LOC100288175 AGRN HES4
dgv2n67	Chr.1:877618 - 1426500 on Build GRCh38	Gain	PUSL1 LOC100130417 LOC105378948 TTLL10-AS1 PERM1 LOC148413 B3GALT6 MIR6727 C1orf159 MRPL20 TNFRSF18 UBE2J2 CPTP MIR200A ACAP3 AGRN HES4 DVL1 SDF4 ANKRD65 TTLL10 MIR200B TNFRSF4 MIR6808 CCNL2 ISG15 AURKAIP1 CPSF3L TMEM88B MIR429 NOC2L PLEKHN1 RNF223 MIR6726 LOC284600 SAMD11 LOC107985728 KLHL17 LINC01342 FAM132A MXRA8 TAS1R3 LOC100288175 SCNN1D
nsv509257	Chr.1:1151955 - 1189470 on Build GRCh38	Insertion	TTLL10 MIR200B MIR200A MIR429 TTLL10-AS1
nsv469848	Chr.1:1146082 - 1322235 on Build GRCh38	Gain	PUSL1 SDF4 TTLL10 MIR200B TNFRSF4 CPSF3L MIR429 TTLL10-AS1 MIR6726 B3GALT6 MIR6727 TNFRSF18 UBE2J2 FAM132A MIR200A ACAP3 SCNN1D

More Information

• Set Membership: Intragenic, Exonic, DGV Variation