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See other SNAP47 CNV Assays ›
Gene Symbol
SNAP47
Assay Reference Genome
Location

Chr.1:227740667 on build GRCh38
Cytoband
1q42.13
Assay ID Hs03337817_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 116841

Gene Name:

 synaptosome associated protein 47

Gene Aliases:

 C1orf142, ESFI5812, HEL-S-290, HEL170, SNAP-47, SVAP1

Location:

 Chr.1:227728168-227781231 on Build GRCh38

Assay Gene Location:

 Within Intron 7
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SNAP47 NM_001323930.1 NP_001310859.1
NM_001323931.1 NP_001310860.1
NM_001323932.1 NP_001310861.1
NM_001323933.1 NP_001310862.1
NM_001323934.1 NP_001310863.1
NM_001323935.1 NP_001310864.1
NM_053052.3 NP_444280.2
NR_136654.1
NR_136655.1
NR_136656.1
NR_136657.1
XM_006711734.3 XP_006711797.1
XM_017000231.1 XP_016855720.1
XM_017000232.1 XP_016855721.1
AK054633.1 BAB70779.1
AY090635.2 AAM09082.1
BC007786.2 AAH07786.2
BC011145.1 AAH11145.1
BC018760.1 AAH18760.2
BC032775.1 AAH32775.1
BX648570.1 CAI45994.1
GQ472206.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1007479 Chr.1:227508167 - 227796765 on Build GRCh38 Gain SNAP47 LOC105373289 ZNF678 JMJD4
nsv826908 Chr.1:227707685 - 228503399 on Build GRCh38 Gain MIR6742 LOC101060022 MIR3620 LOC100506571 HIST3H2A GUK1 MIR5008 C1orf35 HIST3H3 IBA57 LOC107985355 LOC101927401 WNT9A MIR4666A MRPL55 TRIM11 OBSCN C1orf145 TRIM17 JMJD4 GJC2 WNT3A ARF1 PRSS38 IBA57-AS1 SNAP47 LOC105373289 RNF187 HIST3H2BB
esv32853 Chr.1:227692415 - 228670462 on Build GRCh38 Gain MIR3620 LOC100506571 RNA5S2 HIST3H2A MIR5008 RNA5S8 RNA5S7 C1orf35 RNA5S6 IBA57 LOC107985355 TRIM11 RNA5S11 RNA5S14 RNA5S15 JMJD4 GJC2 WNT3A ARF1 RNA5S17 RNA5S10 RNA5S4 IBA57-AS1 SNAP47 DUSP5P1 RNA5S13 HIST3H2BB RHOU MIR6742 LOC101060022 BTNL10 GUK1 RNA5S16 RNA5S12 HIST3H3 LOC105373132 RNA5S9 RNA5S3 LOC101927401 WNT9A MIR4666A MRPL55 OBSCN C1orf145 TRIM17 RNA5S1 PRSS38 RNA5S5 LOC105373289 RNF187
nsv515496 Chr.1:227724773 - 227780237 on Build GRCh38 Loss SNAP47 JMJD4

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

SNARE protein

Gene Ontology Categories:

Function(s) Process(es)


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