Hs03341713_cn

• Gene Symbol: SMG7
• Assay Reference Genome Location: Chr.1:183471976 on build GRCh38
• Cytoband: 1q25.3

Target Gene Details

• Entrez Gene ID: 9887
• Gene Name: SMG7, nonsense mediated mRNA decay factor
• Gene Aliases: C1orf16, EST1C, SGA56M
• Location: Chr.1:183471962-183554193 on Build GRCh38
• Assay Gene Location: Overlaps - Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SMG7	XM_005245648.3			XP_005245705.1
	XM_005245649.3			XP_005245706.1
	XM_006711676.3			XP_006711739.1
	XM_011510205.2			XP_011508507.1
	XM_011510206.2			XP_011508508.1
	XM_011510207.2			XP_011508509.1
	XM_011510208.2			XP_011508510.1
	XM_011510209.2			XP_011508511.1

Target Gene Details

• Entrez Gene ID: 284649
• Gene Name: SMG7 antisense RNA 1
• Gene Aliases: DKFZP564C196
• Location: Chr.1:183460874-183471982 on Build GRCh38
• Assay Gene Location: Overlaps - Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SMG7-AS1	NR_040063.1
	AI793165.1
	AL050020.1	1	294

More Information

Additional Information:

For this assay, SNP(s) [rs112259656] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Non-exonic, non-DGV Variation

Panther Classification:

Molecular Function -

RNA metabolism protein

Gene Ontology Categories:

Process(es)

nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
mRNA export from nucleus
regulation of dephosphorylation

Function(s)

protein binding
telomeric DNA binding
protein phosphatase 2A binding