Hs03351156_cn

• Gene Symbol: HCRTR1
• Assay Reference Genome Location: Chr.1:31628073 on build GRCh38
• Cytoband: 1p35.2

Target Gene Details

• Entrez Gene ID: 3061
• Gene Name: hypocretin receptor 1
• Gene Aliases: OX1R
• Location: Chr.1:31617700-31632518 on Build GRCh38
• Assay Gene Location: Within Intron 9

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
HCRTR1	XM_017001107.1			XP_016856596.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv545951	Chr.1:31626924 - 31699894 on Build GRCh38	Gain	COL16A1 HCRTR1 PEF1
nsv1000976	Chr.1:31612766 - 31700055 on Build GRCh38	Loss	COL16A1 HCRTR1 PEF1
esv2758930	Chr.1:31209533 - 32000730 on Build GRCh38	Loss	LINC01226 MIR4254 COL16A1 SPOCD1 HCRTR1 ADGRB2 NKAIN1 ZCCHC17 TINAGL1 SNRNP40 PTP4A2 FABP3 SERINC2 PEF1 LINC01225

More Information

Additional Information:

For this assay, SNP(s) [rs113461431] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

G-protein coupled receptor

Gene Ontology Categories:

Process(es)

neuropeptide signaling pathway
chemical synaptic transmission
feeding behavior
cellular response to hormone stimulus
regulation of circadian sleep/wake cycle, sleep
regulation of cytosolic calcium ion concentration
response to peptide

Function(s)

G-protein coupled receptor activity
neuropeptide receptor activity
orexin receptor activity
peptide hormone binding
peptide binding