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See other SNAP47 CNV Assays ›
Gene Symbol
SNAP47
Assay Reference Genome
Location

Chr.1:227741850 on build GRCh38
Cytoband
1q42.13
Assay ID Hs03355333_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 116841

Gene Name:

 synaptosome associated protein 47

Gene Aliases:

 C1orf142, ESFI5812, HEL-S-290, HEL170, SNAP-47, SVAP1

Location:

 Chr.1:227728168-227781231 on Build GRCh38

Assay Gene Location:

 Within Intron 7
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SNAP47 NM_001323930.1 NP_001310859.1
NM_001323931.1 NP_001310860.1
NM_001323932.1 NP_001310861.1
NM_001323933.1 NP_001310862.1
NM_001323934.1 NP_001310863.1
NM_001323935.1 NP_001310864.1
NM_053052.3 NP_444280.2
NR_136654.1
NR_136655.1
NR_136656.1
NR_136657.1
XM_006711734.3 XP_006711797.1
XM_017000231.1 XP_016855720.1
XM_017000232.1 XP_016855721.1
AK054633.1 BAB70779.1
AY090635.2 AAM09082.1
BC007786.2 AAH07786.2
BC011145.1 AAH11145.1
BC018760.1 AAH18760.2
BC032775.1 AAH32775.1
BX648570.1 CAI45994.1
GQ472206.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1007479 Chr.1:227508167 - 227796765 on Build GRCh38 Gain SNAP47 ZNF678 JMJD4 LOC105373289
nsv826908 Chr.1:227707685 - 228503399 on Build GRCh38 Gain RNF187 LOC107985355 LOC101927401 HIST3H2BB WNT9A IBA57-AS1 IBA57 C1orf35 MIR3620 HIST3H2A MIR5008 LOC100506571 TRIM11 C1orf145 MIR6742 OBSCN HIST3H3 TRIM17 PRSS38 SNAP47 ARF1 JMJD4 GUK1 LOC105373289 GJC2 MRPL55 MIR4666A LOC101060022 WNT3A
esv32853 Chr.1:227692415 - 228670462 on Build GRCh38 Gain LOC107985355 RNA5S3 RNA5S6 HIST3H2BB WNT9A IBA57-AS1 IBA57 HIST3H2A MIR5008 RNA5S1 TRIM11 C1orf145 OBSCN DUSP5P1 TRIM17 ARF1 RHOU GUK1 LOC105373289 RNA5S7 RNA5S5 MRPL55 RNA5S2 BTNL10 WNT3A RNF187 RNA5S13 LOC101927401 RNA5S15 RNA5S9 C1orf35 MIR3620 RNA5S10 LOC105373132 LOC100506571 MIR6742 RNA5S17 HIST3H3 RNA5S16 RNA5S4 PRSS38 SNAP47 RNA5S12 JMJD4 GJC2 RNA5S14 RNA5S11 MIR4666A RNA5S8 LOC101060022
nsv515496 Chr.1:227724773 - 227780237 on Build GRCh38 Loss SNAP47 JMJD4

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

SNARE protein

Gene Ontology Categories:

Function(s) Process(es)


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