Hs03361993_cn

• Gene Symbol: NOL9
• Assay Reference Genome Location: Chr.1:6521491 on build GRCh38
• Cytoband: 1p36.31

Target Gene Details

• Entrez Gene ID: 79707
• Gene Name: nucleolar protein 9
• Gene Aliases: Grc3, NET6
• Location: Chr.1:6521347-6554598 on Build GRCh38
• Assay Gene Location: Within Exon 13

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
NOL9	NM_024654.4	12	6568	NP_078930.3
	AK026976.1	9	2415	BAB15611.1
	CA432392.1	1	161

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv7880	Chr.1:6417968 - 6611914 on Build GRCh38	Gain+Loss	KLHL21 ESPN NOL9 ZBTB48 MIR4252 PLEKHG5 HES2 TAS1R1 TNFRSF25
nsv545268	Chr.1:6490316 - 6578004 on Build GRCh38	Loss	NOL9 PLEKHG5 TAS1R1
nsv831536	Chr.1:6429326 - 6605343 on Build GRCh38	Loss	KLHL21 ESPN NOL9 ZBTB48 MIR4252 PLEKHG5 TAS1R1 TNFRSF25

More Information

Additional Information:

For this assay, SNP(s) [rs149443960] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

mRNA polyadenylation factor

Gene Ontology Categories:

Process(es)

cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
maturation of 5.8S rRNA
rRNA processing
phosphorylation

Function(s)

RNA binding
protein binding
ATP binding
polynucleotide 5'-hydroxyl-kinase activity