Hs03370231_cn

• Gene Symbol: IFI44
• Assay Reference Genome Location: Chr.1:78653389 on build GRCh38
• Cytoband: 1p31.1

Target Gene Details

• Entrez Gene ID: 10561
• Gene Name: interferon induced protein 44
• Gene Aliases: MTAP44, TLDC5, p44
• Location: Chr.1:78648554-78664078 on Build GRCh38
• Assay Gene Location: Within Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
IFI44	NM_006417.4			NP_006408.3
	NR_135640.1
	NR_135641.1
	XM_005270380.3			XP_005270437.1
	XM_011540516.2			XP_011538818.1
	XM_017000083.1			XP_016855572.1
	AK302527.1
	AK316278.1
	AK316476.1
	AL589497.1
	BC022870.1			AAH22870.1
	DN994910.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv3586554	Chr.1:78649309 - 78655867 on Build GRCh38	Loss	IFI44
nsv1001291	Chr.1:78598959 - 79684864 on Build GRCh38	Loss	IFI44L IFI44 ADGRL4
esv2677291	Chr.1:78649344 - 78655896 on Build GRCh38	Deletion	IFI44
nsv830315	Chr.1:78542758 - 78734906 on Build GRCh38	Gain	IFI44L IFI44

More Information

Additional Information:

For this assay, SNP(s) [rs138407981,rs72935635] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

response to virus