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See other SNAP47 CNV Assays ›
Gene Symbol
SNAP47
Assay Reference Genome
Location

Chr.1:227730059 on build GRCh38
Cytoband
1q42.13
Assay ID Hs03371792_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 116841

Gene Name:

 synaptosome associated protein 47

Gene Aliases:

 C1orf142, ESFI5812, HEL-S-290, HEL170, SNAP-47, SVAP1

Location:

 Chr.1:227728168-227781231 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SNAP47 NM_001323930.1 NP_001310859.1
NM_001323932.1 NP_001310861.1
NM_001323933.1 NP_001310862.1
NR_136654.1
XM_017000231.1 XP_016855720.1
XM_017000232.1 XP_016855721.1
AK055266.1
AK093736.1
BC032775.1 AAH32775.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1007479 Chr.1:227508167 - 227796765 on Build GRCh38 Gain JMJD4 ZNF678 LOC105373289 SNAP47
nsv826908 Chr.1:227707685 - 228503399 on Build GRCh38 Gain MIR4666A JMJD4 LOC101060022 IBA57 HIST3H2A TRIM11 GUK1 C1orf35 LOC105373289 LOC100506571 WNT9A PRSS38 RNF187 ARF1 LOC101927401 IBA57-AS1 OBSCN LOC107985355 HIST3H3 GJC2 MIR5008 C1orf145 SNAP47 MIR6742 WNT3A MRPL55 MIR3620 HIST3H2BB TRIM17
esv32853 Chr.1:227692415 - 228670462 on Build GRCh38 Gain RNA5S5 IBA57 TRIM11 RNA5S11 RNA5S9 GUK1 LOC105373289 LOC100506571 WNT9A RNA5S3 RNA5S15 LOC107985355 HIST3H3 RHOU C1orf145 RNA5S4 RNA5S6 RNA5S7 MRPL55 MIR4666A JMJD4 LOC101060022 HIST3H2A RNA5S14 C1orf35 RNA5S12 PRSS38 RNA5S2 RNF187 LOC105373132 ARF1 LOC101927401 RNA5S16 IBA57-AS1 OBSCN RNA5S17 BTNL10 GJC2 MIR5008 RNA5S1 SNAP47 RNA5S8 MIR6742 RNA5S10 WNT3A RNA5S13 DUSP5P1 MIR3620 HIST3H2BB TRIM17
nsv515496 Chr.1:227724773 - 227780237 on Build GRCh38 Loss JMJD4 SNAP47
nsv945344 Chr.1:227712238 - 227730075 on Build GRCh38 Duplication SNAP47

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

SNARE protein

Gene Ontology Categories:

Function(s) Process(es)


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