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See other SNAP47 CNV Assays ›
Gene Symbol
SNAP47
Assay Reference Genome
Location

Chr.1:227739892 on build GRCh38
Cytoband
1q42.13
Assay ID Hs03381439_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 116841

Gene Name:

 synaptosome associated protein 47

Gene Aliases:

 C1orf142, ESFI5812, HEL-S-290, HEL170, SNAP-47, SVAP1

Location:

 Chr.1:227728168-227781231 on Build GRCh38

Assay Gene Location:

 Within Intron 7
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SNAP47 NM_001323930.1 NP_001310859.1
NM_001323931.1 NP_001310860.1
NM_001323932.1 NP_001310861.1
NM_001323933.1 NP_001310862.1
NM_001323934.1 NP_001310863.1
NM_001323935.1 NP_001310864.1
NM_053052.3 NP_444280.2
NR_136654.1
NR_136655.1
NR_136656.1
NR_136657.1
XM_006711734.3 XP_006711797.1
XM_017000231.1 XP_016855720.1
XM_017000232.1 XP_016855721.1
AK054633.1 BAB70779.1
AY090635.2 AAM09082.1
BC007786.2 AAH07786.2
BC011145.1 AAH11145.1
BC018760.1 AAH18760.2
BC032775.1 AAH32775.1
BX648570.1 CAI45994.1
GQ472206.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1007479 Chr.1:227508167 - 227796765 on Build GRCh38 Gain JMJD4 LOC105373289 ZNF678 SNAP47
nsv826908 Chr.1:227707685 - 228503399 on Build GRCh38 Gain LOC107985355 GJC2 TRIM17 IBA57-AS1 MIR6742 OBSCN C1orf35 MRPL55 IBA57 WNT9A HIST3H2BB LOC101927401 ARF1 SNAP47 RNF187 WNT3A LOC100506571 JMJD4 LOC101060022 MIR3620 TRIM11 MIR4666A C1orf145 GUK1 HIST3H3 LOC105373289 PRSS38 MIR5008 HIST3H2A
esv32853 Chr.1:227692415 - 228670462 on Build GRCh38 Gain RNA5S5 TRIM17 OBSCN RNA5S1 RNA5S14 RNA5S9 RNA5S17 WNT9A LOC101927401 SNAP47 WNT3A LOC100506571 RNA5S2 LOC101060022 MIR3620 RNA5S8 C1orf145 GUK1 RNA5S12 DUSP5P1 RHOU RNA5S15 PRSS38 MIR5008 LOC107985355 GJC2 IBA57-AS1 MIR6742 C1orf35 RNA5S4 MRPL55 RNA5S13 IBA57 RNA5S10 RNA5S16 HIST3H2BB ARF1 LOC105373132 RNF187 JMJD4 TRIM11 MIR4666A BTNL10 RNA5S11 HIST3H3 RNA5S3 RNA5S7 LOC105373289 RNA5S6 HIST3H2A
nsv515496 Chr.1:227724773 - 227780237 on Build GRCh38 Loss JMJD4 SNAP47

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

SNARE protein

Gene Ontology Categories:

Function(s) Process(es)


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